RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 OR4K2Q8NGD2 314 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 OR5K1Q8NHB7 308 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 DNAJB14Q8TBM8 379 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 FAM174AQ8TBP5 190 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 FNDC8Q8TC99 324 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 MAGEE2Q8TD90 523 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-250ENST00000568290 GAB3Q8WWW8 586 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 FAM162AQ96A26 154 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 SLCO4A1Q96BD0 722 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 TBC1D20Q96BZ9 403 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 BIRC7Q96CA5 298 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 ITPKCQ96DU7 683 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 LINGO1Q96FE5 620 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 ITCHQ96J02 903 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 KLHL5Q96PQ7 755 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 CGREF1Q99674 301 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 GPR21Q99679 349 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 APOL4Q9BPW4 351 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 SPON2Q9BUD6 331 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 C2orf49Q9BVC5 232 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-250ENST00000568290 CHID1Q9BWS9 393 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 EMILIN2Q9BXX0 1053 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 MUC3BQ9H195 1237 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 NANOGQ9H9S0 305 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 GPN2Q9H9Y4 310 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-250ENST00000568290 IL1RL2Q9HB29 575 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 PDFQ9HBH1 243 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 TMEM30AQ9NV96 361 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 SMOXQ9NWM0 555 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 CMTM6Q9NX76 183 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-250ENST00000568290 LSM7Q9UK45 103 aaKnown RBP7.53□□□□□ -1.2
ATXN3-250ENST00000568290 ERVW-1Q9UQF0 538 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 FAM50BQ9Y247 325 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 OARD1Q9Y530 152 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 ARL5AQ9Y689 179 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 SBF1O95248 1867 aa7.53□□□□□ -1.2
ATXN3-250ENST00000568290 ELOVL7A1L3X0 281 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 SLC38A8A6NNN8 435 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 TNFRSF10AO00220 468 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 SOCS2O14508 198 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 EI24O14681 340 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 SLC16A5O15375 505 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 E2F6O75461 281 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 MYO1DO94832 1006 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 OR6B1O95007 311 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 PRSS23O95084 383 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 CPNE6O95741 557 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 CST1P01037 141 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 IGHA2P01877 340 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 ASGR1P07306 291 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 C8GP07360 202 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 ALOX5P09917 674 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 CCDC159P0C7I6 412 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 MBL2P11226 248 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-250ENST00000568290 CDK4P11802 303 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 CKMT2P17540 419 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 GGT1P19440 569 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 ATP6V1B2P21281 511 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 FGFR3P22607 806 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 SLC5A2P31639 672 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 GRK3P35626 688 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 HMGCLP35914 325 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 ARSDP51689 593 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 ZNF157P51786 506 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-250ENST00000568290 PNLIPRP1P54315 467 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 HUNKP57058 714 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 CXCR4P61073 352 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 CREMQ03060 361 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 VAC14Q08AM6 782 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 SP140Q13342 867 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 KCNC3Q14003 757 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 SEMA3AQ14563 771 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 ZNF846Q147U1 533 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 OR4D1Q15615 310 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 TSNQ15631 228 aaKnown RBP7.52□□□□□ -1.21
ATXN3-250ENST00000568290 DDR2Q16832 855 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 PAN2Q504Q3 1202 aaKnown RBP7.52□□□□□ -1.21
ATXN3-250ENST00000568290 ALFQ53S48 1182 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 ZNF789Q5FWF6 425 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 ADGRF1Q5T601 910 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 FAM171A1Q5VUB5 890 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 TPGS2Q68CL5 300 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 HMBOX1Q6NT76 420 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 CYP20A1Q6UW02 462 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 KCTD8Q6ZWB6 473 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 USP51Q70EK9 711 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 SNX20Q7Z614 316 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 IFNEQ86WN2 208 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 CMTR2Q8IYT2 770 aaKnown RBP7.52□□□□□ -1.21
ATXN3-250ENST00000568290 HJURPQ8NCD3 748 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-250ENST00000568290 LPCAT1Q8NF37 534 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 OR13C4Q8NGS5 318 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 SNIP1Q8TAD8 396 aaKnown RBP7.52□□□□□ -1.21
ATXN3-250ENST00000568290 BPIFB1Q8TDL5 484 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 CSGALNACT1Q8TDX6 532 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 ADAMTS19Q8TE59 1207 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 UBTD2Q8WUN7 234 aa7.52□□□□□ -1.21
ATXN3-250ENST00000568290 TRUB1Q8WWH5 349 aaKnown RBP7.52□□□□□ -1.21
ATXN3-250ENST00000568290 SLC13A3Q8WWT9 602 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms