RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	ZNF385C	Q66K41	422 aa	Predicted RBP	13.38	□□□□□ -0.27
SMG1-213	ENST00000567737	FBXO38	Q6PIJ6	1188 aa		13.38	□□□□□ -0.27
SMG1-213	ENST00000567737	MEX3B	Q6ZN04	569 aa	Known RBP	13.38	□□□□□ -0.27
SMG1-213	ENST00000567737	RETREG3	Q86VR2	466 aa		13.38	□□□□□ -0.27
SMG1-213	ENST00000567737	ZNF677	Q86XU0	584 aa		13.38	□□□□□ -0.27
SMG1-213	ENST00000567737	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.38	□□□□□ -0.27
SMG1-213	ENST00000567737	ANKRD20A12P	Q8NF67	263 aa		13.38	□□□□□ -0.27
SMG1-213	ENST00000567737	OR1N1	Q8NGS0	311 aa		13.38	□□□□□ -0.27
SMG1-213	ENST00000567737	SLC6A20	Q9NP91	592 aa		13.38	□□□□□ -0.27
SMG1-213	ENST00000567737	SEC14L3	Q9UDX4	400 aa		13.38	□□□□□ -0.27
SMG1-213	ENST00000567737	SIGLEC16	A6NMB1	481 aa		13.37	□□□□□ -0.27
SMG1-213	ENST00000567737	ZNF749	O43361	778 aa		13.37	□□□□□ -0.27
SMG1-213	ENST00000567737	KPNA2	P52292	529 aa	Known RBP	13.37	□□□□□ -0.27
SMG1-213	ENST00000567737	ITK	Q08881	620 aa		13.37	□□□□□ -0.27
SMG1-213	ENST00000567737	C3orf20	Q8ND61	904 aa		13.37	□□□□□ -0.27
SMG1-213	ENST00000567737	CATSPER1	Q8NEC5	780 aa		13.37	□□□□□ -0.27
SMG1-213	ENST00000567737	TAAR6	Q96RI8	345 aa		13.37	□□□□□ -0.27
SMG1-213	ENST00000567737	ENKD1	Q9H0I2	346 aa		13.37	□□□□□ -0.27
SMG1-213	ENST00000567737	VPS16	Q9H269	839 aa		13.37	□□□□□ -0.27
SMG1-213	ENST00000567737	ADAM22	Q9P0K1	906 aa		13.37	□□□□□ -0.27
SMG1-213	ENST00000567737	IFT80	Q9P2H3	777 aa	Predicted RBP	13.37	□□□□□ -0.27
SMG1-213	ENST00000567737	FBXL4	Q9UKA2	621 aa		13.37	□□□□□ -0.27
SMG1-213	ENST00000567737	CHKB	Q9Y259	395 aa		13.37	□□□□□ -0.27
SMG1-213	ENST00000567737	OR6C74	A6NCV1	312 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	ALOX12B	O75342	701 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	CDK14	O94921	469 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	MSL3P1	P0C860	447 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	CA4	P22748	312 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	NSF	P46459	744 aa	Known RBP	13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	IST1	P53990	364 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	CDR2	Q01850	454 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	LTB	Q06643	244 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	PTP4A2	Q12974	167 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	PRKAA1	Q13131	559 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	CDSN	Q15517	529 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	RPE65	Q16518	533 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	CA9	Q16790	459 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	ERICH6B	Q5W0A0	696 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	ALS2CL	Q60I27	953 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	PLEKHA7	Q6IQ23	1121 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	ISLR2	Q6UXK2	745 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	LINC00696	Q6ZRV3	163 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	ZNF547	Q8IVP9	402 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	GPR135	Q8IZ08	494 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	SLC20A1	Q8WUM9	679 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	GLYATL1	Q969I3	302 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	PPM1M	Q96MI6	270 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	MCEE	Q96PE7	176 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	LYSMD1	Q96S90	227 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	KCTD15	Q96SI1	283 aa	Predicted RBP	13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	SPSB2	Q99619	263 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	FOXC2	Q99958	501 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	USB1	Q9BQ65	265 aa	Known RBP	13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	CNPY3	Q9BT09	278 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	NDC1	Q9BTX1	674 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	ZSCAN5A	Q9BUG6	496 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	LHPP	Q9H008	270 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	CXXC4	Q9H2H0	198 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	NT5M	Q9NPB1	228 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	C1GALT1	Q9NS00	363 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	DTL	Q9NZJ0	730 aa		13.36	□□□□□ -0.27
SMG1-213	ENST00000567737	MTX2	O75431	263 aa		13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	CALB1	P05937	261 aa		13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	CBSL	P0DN79	551 aa		13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	FOSL1	P15407	271 aa		13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	DNAJA1	P31689	397 aa	Known RBP	13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	CBS	P35520	551 aa		13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	MTIF2	P46199	727 aa	Known RBP	13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	ARG2	P78540	354 aa		13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	MFAP5	Q13361	173 aa		13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	GTF2H3	Q13889	308 aa		13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	C1orf189	Q5VU69	101 aa		13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	DNAJC24	Q6P3W2	148 aa		13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	TRAPPC5	Q8IUR0	188 aa		13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	ATPAF2	Q8N5M1	289 aa		13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	LPCAT1	Q8NF37	534 aa		13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	NACC2	Q96BF6	587 aa		13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	LMF1	Q96S06	567 aa		13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	MDFI	Q99750	246 aa		13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	TDRD1	Q9BXT4	1180 aa	Known RBP	13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	POLR1E	Q9GZS1	481 aa	Known RBP	13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	GPAM	Q9HCL2	828 aa		13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	IMP3	Q9NV31	184 aa	Known RBP	13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	NOCT	Q9UK39	431 aa	Known RBP	13.35	□□□□□ -0.27
SMG1-213	ENST00000567737	PSMD13	Q9UNM6	376 aa		13.35	□□□□□ -0.27
SMG1-213	ENST00000567737		F8VZ95	297 aa		13.34	□□□□□ -0.27
SMG1-213	ENST00000567737	MAFK	O60675	156 aa		13.34	□□□□□ -0.27
SMG1-213	ENST00000567737	SLC19A2	O60779	497 aa		13.34	□□□□□ -0.27
SMG1-213	ENST00000567737	KCNJ13	O60928	360 aa		13.34	□□□□□ -0.27
SMG1-213	ENST00000567737	CRYAB	P02511	175 aa	Known RBP	13.34	□□□□□ -0.27
SMG1-213	ENST00000567737	UMOD	P07911	640 aa		13.34	□□□□□ -0.27
SMG1-213	ENST00000567737	POLR2C	P19387	275 aa	Predicted RBP	13.34	□□□□□ -0.27
SMG1-213	ENST00000567737	CDH6	P55285	790 aa		13.34	□□□□□ -0.27
SMG1-213	ENST00000567737	FOXL2	P58012	376 aa		13.34	□□□□□ -0.27
SMG1-213	ENST00000567737	RPL26	P61254	145 aa	Known RBP	13.34	□□□□□ -0.27
SMG1-213	ENST00000567737	RPL7A	P62424	266 aa	Known RBP	13.34	□□□□□ -0.27
SMG1-213	ENST00000567737	DCD	P81605	110 aa	Known RBP	13.34	□□□□□ -0.27
SMG1-213	ENST00000567737	FMO1	Q01740	532 aa		13.34	□□□□□ -0.27
SMG1-213	ENST00000567737	XRCC4	Q13426	336 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms