RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 KCNK5O95279 499 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 PIGNO95427 931 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 C22orf31O95567 290 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 CLDN1O95832 211 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 HPRP00739 348 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 EIF3BP55884 814 aaKnown RBP1.87□□□□□ -2.11
SMG1-212ENST00000566328 CAPRIN1Q14444 709 aaKnown RBP1.87□□□□□ -2.11
SMG1-212ENST00000566328 CDONQ4KMG0 1287 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 KLC3Q6P597 504 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 TSSK4Q6SA08 328 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 DENND5BQ6ZUT9 1274 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 CCDC190Q86UF4 302 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 KCNMB4Q86W47 210 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 HOGA1Q86XE5 327 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 SPICE1Q8N0Z3 855 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 ZNF843Q8N446 348 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.87□□□□□ -2.11
SMG1-212ENST00000566328 SPATA5Q8NB90 893 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 C17orf47Q8NEP4 570 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 TRIM63Q969Q1 353 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 RFT1Q96AA3 541 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 SEMA6AQ9H2E6 1030 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 DENND2DQ9H6A0 471 aaPredicted RBP1.87□□□□□ -2.11
SMG1-212ENST00000566328 RIC8AQ9NPQ8 531 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 FBXL17Q9UF56 701 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 FBXW11Q9UKB1 542 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 INTS6Q9UL03 887 aaKnown RBP1.87□□□□□ -2.11
SMG1-212ENST00000566328 CLIC4Q9Y696 253 aa1.87□□□□□ -2.11
SMG1-212ENST00000566328 CCDC194A0A1B0GVG4 234 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 A0A1W2PRG0 241 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 PHOX2AO14813 284 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 ATP2A1O14983 1001 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 IPO7O95373 1038 aaKnown RBP1.86□□□□□ -2.11
SMG1-212ENST00000566328 ICAM1P05362 532 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 MMP12P39900 470 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 PAFAH1B1P43034 410 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 NKX2-1P43699 371 aaPredicted RBP1.86□□□□□ -2.11
SMG1-212ENST00000566328 CCR5P51681 352 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 CYCSP99999 105 aaKnown RBP1.86□□□□□ -2.11
SMG1-212ENST00000566328 PRKCZQ05513 592 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 LRMPQ12912 555 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 RNF212Q495C1 297 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 KRTAP11-1Q8IUC1 163 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 CRYBG2Q8N1P7 616 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 DCLK2Q8N568 766 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 ZNF519Q8TB69 540 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 ZBTB10Q96DT7 871 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 APOPT1Q96IL0 206 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 MYADMQ96S97 322 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 GPR63Q9BZJ6 419 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 PIGMQ9H3S5 423 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 EPB41L5Q9HCM4 733 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 MIOSQ9NXC5 875 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 TAB2Q9NYJ8 693 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 TAGLN3Q9UI15 199 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 PPP1R3CQ9UQK1 317 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 MYO15BQ96JP2 1530 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 DCAF1Q9Y4B6 1507 aa1.86□□□□□ -2.11
SMG1-212ENST00000566328 A0A1W2PN81 502 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 MED19A0JLT2 244 aaPredicted RBP1.85□□□□□ -2.11
SMG1-212ENST00000566328 MSGN1A6NI15 193 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 ASB14A6NK59 587 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 PRKRAO75569 313 aaKnown RBP1.85□□□□□ -2.11
SMG1-212ENST00000566328 EFNA1P20827 205 aaPredicted RBP1.85□□□□□ -2.11
SMG1-212ENST00000566328 HRH2P25021 359 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 GGT5P36269 586 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 CHRNA7P36544 502 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 TMEM50BP56557 158 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 HERV-K104P61576 105 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 GAGE2BQ13066 116 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 MVPQ14764 893 aaKnown RBP1.85□□□□□ -2.11
SMG1-212ENST00000566328 ADIPOQQ15848 244 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 GAGE2EQ4V326 116 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 DCAF10Q5QP82 559 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 FAM109BQ6ICB4 259 aaPredicted RBP1.85□□□□□ -2.11
SMG1-212ENST00000566328 GAGE2AQ6NT46 116 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 CORO6Q6QEF8 472 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 TPRG1Q6ZUI0 275 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 Q6ZVH6 145 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 PIGZQ86VD9 579 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 LACC1Q8IV20 430 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 Q8NBF4 154 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 OR1J1Q8NGS3 322 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 OR4C3Q8NH37 302 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 MIPOL1Q8TD10 442 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 HERVK_113Q902F9 699 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 SGCDQ92629 289 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 LINC00167Q96N53 147 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 SEPT5Q99719 369 aaPredicted RBP1.85□□□□□ -2.11
SMG1-212ENST00000566328 ACKR4Q9NPB9 350 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 ABI3Q9P2A4 366 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 GAGE2DQ9UEU5 116 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 SARDHQ9UL12 918 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 TBX20Q9UMR3 447 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 MYH15Q9Y2K3 1946 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 MROH2BQ7Z745 1585 aa1.85□□□□□ -2.11
SMG1-212ENST00000566328 COL16A1Q07092 1604 aaPredicted RBP1.84□□□□□ -2.11
SMG1-212ENST00000566328 ATAD2BQ9ULI0 1458 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 A0A1W2PRB8 838 aa1.84□□□□□ -2.11
SMG1-212ENST00000566328 ACOD1A6NK06 481 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms