RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 TCAF1Q9Y4C2 921 aa9.7□□□□□ -0.86
CNOT1-208ENST00000565697 PCDHB11Q9Y5F2 797 aa9.7□□□□□ -0.86
CNOT1-208ENST00000565697 HEBP2Q9Y5Z4 205 aa9.7□□□□□ -0.86
CNOT1-208ENST00000565697 SPEGQ15772 3267 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.69□□□□□ -0.86
CNOT1-208ENST00000565697 PMS2P1A4D2B8 440 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 IFRD1O00458 451 aaPredicted RBP9.69□□□□□ -0.86
CNOT1-208ENST00000565697 KLK10O43240 276 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 KRT14P02533 472 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 C9P02748 559 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 FTH1P02794 183 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 ANKRD34CP0C6C1 535 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 LIPCP11150 499 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 MTHFD1P11586 935 aaKnown RBP9.69□□□□□ -0.86
CNOT1-208ENST00000565697 MPSTP25325 297 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 ITPKBP27987 946 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 GRIA1P42261 906 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 CAPZBP47756 277 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 TMPRSS3P57727 454 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 PLOD1Q02809 727 aaPredicted RBP9.69□□□□□ -0.86
CNOT1-208ENST00000565697 TLE3Q04726 772 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 ACVR1Q04771 509 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 MN1Q10571 1320 aaPredicted RBP9.69□□□□□ -0.86
CNOT1-208ENST00000565697 RPA4Q13156 261 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 GPR18Q14330 331 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 KRT33BQ14525 404 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 PLCL1Q15111 1095 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 CCDC38Q502W7 563 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 FASTKD1Q53R41 847 aaKnown RBP9.69□□□□□ -0.86
CNOT1-208ENST00000565697 SNAP47Q5SQN1 464 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 FRYQ5TBA9 3013 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 ARMC3Q5W041 872 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 LRRC8BQ6P9F7 803 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 CYB5D1Q6P9G0 228 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 PACS1Q6VY07 963 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 FAM83HQ6ZRV2 1179 aaPredicted RBP9.69□□□□□ -0.86
CNOT1-208ENST00000565697 ARHGAP22Q7Z5H3 698 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 PDZD3Q86UT5 571 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 SLC35F6Q8N357 371 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 OR13J1Q8NGT2 312 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 OR6P1Q8NGX9 317 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 OR4L1Q8NH43 312 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 ACTRT1Q8TDG2 376 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 GRK7Q8WTQ7 553 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 HDAC10Q969S8 669 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 ZDHHC12Q96GR4 267 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 SGSM3Q96HU1 749 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 C12orf66Q96MD2 445 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 TEFMQ96QE5 360 aaKnown RBP9.69□□□□□ -0.86
CNOT1-208ENST00000565697 OSBPL9Q96SU4 736 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 INSM2Q96T92 566 aaPredicted RBP9.69□□□□□ -0.86
CNOT1-208ENST00000565697 ZPBPQ9BS86 351 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 DDA1Q9BW61 102 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 TSSK1BQ9BXA7 367 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 RAB33BQ9H082 229 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 WWP1Q9H0M0 922 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 KCNF1Q9H3M0 494 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 IMP3Q9NV31 184 aaKnown RBP9.69□□□□□ -0.86
CNOT1-208ENST00000565697 TRMT1Q9NXH9 659 aaKnown RBP9.69□□□□□ -0.86
CNOT1-208ENST00000565697 SLC39A1Q9NY26 324 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 SMARCAL1Q9NZC9 954 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 TMEM9Q9P0T7 183 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 EPHA6Q9UF33 1036 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 PSMD13Q9UNM6 376 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 PCDHGA3Q9Y5H0 932 aa9.69□□□□□ -0.86
CNOT1-208ENST00000565697 PRAMEF33A0A0G2JMD5 474 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 CCDC78A2IDD5 438 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 CCDC162PA2VCL2 907 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 EFCAB7A8K855 629 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 A8MU76 341 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 AGRPO00253 132 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 LIN7AO14910 233 aaPredicted RBP9.68□□□□□ -0.86
CNOT1-208ENST00000565697 PFDN6O15212 129 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 CAPN5O15484 640 aaPredicted RBP9.68□□□□□ -0.86
CNOT1-208ENST00000565697 SGTAO43765 313 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 PRAMEF10O60809 474 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 GOT2P00505 430 aaKnown RBP9.68□□□□□ -0.86
CNOT1-208ENST00000565697 POLBP06746 335 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 OR56A5P0C7T3 313 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 FGF3P11487 239 aaPredicted RBP9.68□□□□□ -0.86
CNOT1-208ENST00000565697 CCL4P13236 92 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 TYRP1P17643 537 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 TCP1P17987 556 aaKnown RBP9.68□□□□□ -0.86
CNOT1-208ENST00000565697 FOXN2P32314 431 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 COILP38432 576 aaPredicted RBP9.68□□□□□ -0.86
CNOT1-208ENST00000565697 ETV5P41161 510 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 CD151P48509 253 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 FNTAP49354 379 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 CDKN1CP49918 316 aaPredicted RBP9.68□□□□□ -0.86
CNOT1-208ENST00000565697 ARSDP51689 593 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 SESN2P58004 480 aaPredicted RBP9.68□□□□□ -0.86
CNOT1-208ENST00000565697 GPS1Q13098 491 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 DBN1Q16643 649 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 CYP1B1Q16678 543 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 DCAF12Q5T6F0 453 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 CAPRIN2Q6IMN6 1127 aaKnown RBP9.68□□□□□ -0.86
CNOT1-208ENST00000565697 CCDC137Q6PK04 289 aaKnown RBP9.68□□□□□ -0.86
CNOT1-208ENST00000565697 CEACAM20Q6UY09 585 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 OOSP2Q86WS3 158 aa9.68□□□□□ -0.86
CNOT1-208ENST00000565697 FAM129CQ86XR2 697 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms