RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 DNAJC1Q96KC8 554 aaKnown RBP16.37■□□□□ 0.21
USB1-211ENST00000565662 C12orf66Q96MD2 445 aa16.37■□□□□ 0.21
USB1-211ENST00000565662 TGM7Q96PF1 710 aa16.37■□□□□ 0.21
USB1-211ENST00000565662 NAP1L3Q99457 506 aaPredicted RBP16.37■□□□□ 0.21
USB1-211ENST00000565662 SYTL2Q9HCH5 934 aa16.37■□□□□ 0.21
USB1-211ENST00000565662 IMP3Q9NV31 184 aaKnown RBP16.37■□□□□ 0.21
USB1-211ENST00000565662 SIDT1Q9NXL6 827 aaKnown RBP16.37■□□□□ 0.21
USB1-211ENST00000565662 DRG1Q9Y295 367 aaKnown RBP16.37■□□□□ 0.21
USB1-211ENST00000565662 SDK2Q58EX2 2172 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 MROH6A6NGR9 719 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 ZNF891A8MT65 544 aaPredicted RBP16.36■□□□□ 0.21
USB1-211ENST00000565662 PBLDP30039 288 aaPredicted RBP16.36■□□□□ 0.21
USB1-211ENST00000565662 ARL4DP49703 201 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 GDF10P55107 478 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 POU6F1Q14863 301 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 CACHD1Q5VU97 1274 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 ANKS6Q68DC2 871 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 IRGCQ6NXR0 463 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 ACVR1CQ8NER5 493 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 KLHL6Q8WZ60 621 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 TTC9Q92623 222 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 NKD1Q969G9 470 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 CDKN2AIPNLQ96HQ2 116 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 ARHGAP9Q9BRR9 750 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 MVB12BQ9H7P6 319 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 FANCEQ9HB96 536 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 OCIAD1Q9NX40 245 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 OGFRQ9NZT2 677 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 KLHL3Q9UH77 587 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 PILRAQ9UKJ1 303 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 R3HDM2Q9Y2K5 976 aaKnown RBP16.36■□□□□ 0.21
USB1-211ENST00000565662 PCDHGA4Q9Y5G9 962 aa16.36■□□□□ 0.21
USB1-211ENST00000565662 OR5K3A6NET4 321 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 GOLGA6L3A6NEY3 463 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 A8MU76 341 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 PFDN6O15212 129 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 GPR39O43194 453 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 OR56A5P0C7T3 313 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 TYRP1P17643 537 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 NELFEP18615 380 aaKnown RBP16.35■□□□□ 0.21
USB1-211ENST00000565662 ADRA1DP25100 572 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 MPSTP25325 297 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 SARNPP82979 210 aaKnown RBP16.35■□□□□ 0.21
USB1-211ENST00000565662 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.35■□□□□ 0.21
USB1-211ENST00000565662 DNTTIP2Q5QJE6 756 aaKnown RBP16.35■□□□□ 0.21
USB1-211ENST00000565662 TMTC4Q5T4D3 741 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 DET1Q7L5Y6 550 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 TAS2R42Q7RTR8 314 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 SERPINA9Q86WD7 417 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 PPP1R3BQ86XI6 285 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 PPHLN1Q8NEY8 458 aaKnown RBP16.35■□□□□ 0.21
USB1-211ENST00000565662 RSC1A1Q92681 617 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 MED8Q96G25 268 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 SLC45A3Q96JT2 553 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 WWP1Q9H0M0 922 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 COG4Q9H9E3 785 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 RAB6BQ9NRW1 208 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 ANAPC5Q9UJX4 755 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 WDR37Q9Y2I8 494 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 MRFAP1Q9Y605 127 aa16.35■□□□□ 0.21
USB1-211ENST00000565662 UBA6A0AVT1 1052 aaPredicted RBP16.34■□□□□ 0.21
USB1-211ENST00000565662 STK17BO94768 372 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 FGF5P12034 268 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 GFERP55789 205 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 PRAMEP78395 509 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 TMPRSS15P98073 1019 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 FOXM1Q08050 763 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 SPARCL1Q14515 664 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 FAM182AQ5T1J6 154 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 CAPRIN2Q6IMN6 1127 aaKnown RBP16.34■□□□□ 0.21
USB1-211ENST00000565662 GSTA5Q7RTV2 222 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 CFAP206Q8IYR0 622 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 MPP5Q8N3R9 675 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 SIDT2Q8NBJ9 832 aaKnown RBP16.34■□□□□ 0.21
USB1-211ENST00000565662 ATG4AQ8WYN0 398 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 SLC41A2Q96JW4 573 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 BBC3Q96PG8 261 aaPredicted RBP16.34■□□□□ 0.21
USB1-211ENST00000565662 IL22Q9GZX6 179 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 ADNPQ9H2P0 1102 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 GPN2Q9H9Y4 310 aaPredicted RBP16.34■□□□□ 0.21
USB1-211ENST00000565662 ETNK1Q9HBU6 452 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 LZTFL1Q9NQ48 299 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 POLG2Q9UHN1 485 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 SLC24A2Q9UI40 661 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 KCND3Q9UK17 655 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 PSMD13Q9UNM6 376 aa16.34■□□□□ 0.21
USB1-211ENST00000565662 ZBTB11O95625 1053 aaPredicted RBP16.33■□□□□ 0.2
USB1-211ENST00000565662 DLGAP3O95886 979 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 RPN2P04844 631 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 APRTP07741 180 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 HSD11B2P80365 405 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 ACVR1Q04771 509 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 OLIG2Q13516 323 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 PTPRCAPQ14761 206 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 TGIF1Q15583 401 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 FAM83HQ6ZRV2 1179 aaPredicted RBP16.33■□□□□ 0.2
USB1-211ENST00000565662 RASGRP3Q8IV61 690 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 OR52K1Q8NGK4 314 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 GPR150Q8NGU9 434 aa16.33■□□□□ 0.2
USB1-211ENST00000565662 STAMBPL1Q96FJ0 436 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms