RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 SKIDA1Q1XH10 827 aa23.18■■□□□ 1.3
RAB40C-209ENST00000565511 COLEC12Q5KU26 742 aa23.18■■□□□ 1.3
RAB40C-209ENST00000565511 PWWP2BQ6NUJ5 590 aa23.18■■□□□ 1.3
RAB40C-209ENST00000565511 TMTC1Q8IUR5 882 aa23.18■■□□□ 1.3
RAB40C-209ENST00000565511 TMEM139Q8IV31 216 aa23.18■■□□□ 1.3
RAB40C-209ENST00000565511 OR2L2Q8NH16 312 aa23.18■■□□□ 1.3
RAB40C-209ENST00000565511 STAMBPL1Q96FJ0 436 aa23.18■■□□□ 1.3
RAB40C-209ENST00000565511 DNAJC1Q96KC8 554 aaKnown RBP23.18■■□□□ 1.3
RAB40C-209ENST00000565511 EFHD1Q9BUP0 239 aa23.18■■□□□ 1.3
RAB40C-209ENST00000565511 LUC7LQ9NQ29 371 aaKnown RBP23.18■■□□□ 1.3
RAB40C-209ENST00000565511 ZNF71Q9NQZ8 489 aaPredicted RBP23.18■■□□□ 1.3
RAB40C-209ENST00000565511 SLC24A2Q9UI40 661 aa23.18■■□□□ 1.3
RAB40C-209ENST00000565511 R3HDM2Q9Y2K5 976 aaKnown RBP23.18■■□□□ 1.3
RAB40C-209ENST00000565511 CCDC66A2RUB6 948 aa23.17■■□□□ 1.3
RAB40C-209ENST00000565511 C5orf60A6NFR6 353 aa23.17■■□□□ 1.3
RAB40C-209ENST00000565511 LDB2O43679 373 aa23.17■■□□□ 1.3
RAB40C-209ENST00000565511 NAP1L1P55209 391 aaKnown RBP23.17■■□□□ 1.3
RAB40C-209ENST00000565511 TUBB3Q13509 450 aa23.17■■□□□ 1.3
RAB40C-209ENST00000565511 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.17■■□□□ 1.3
RAB40C-209ENST00000565511 ZNF658BQ4V348 819 aaPredicted RBP23.17■■□□□ 1.3
RAB40C-209ENST00000565511 CT55Q8WUE5 264 aa23.17■■□□□ 1.3
RAB40C-209ENST00000565511 ZNF514Q96K75 400 aaPredicted RBP23.17■■□□□ 1.3
RAB40C-209ENST00000565511 TUBD1Q9UJT1 453 aa23.17■■□□□ 1.3
RAB40C-209ENST00000565511 AAR2Q9Y312 384 aaKnown RBP23.17■■□□□ 1.3
RAB40C-209ENST00000565511 FLNCQ14315 2725 aa23.17■■□□□ 1.3
RAB40C-209ENST00000565511 TCRBV7S2A1N4TA0A589 114 aa23.16■■□□□ 1.3
RAB40C-209ENST00000565511 METTL18O95568 372 aa23.16■■□□□ 1.3
RAB40C-209ENST00000565511 POLBP06746 335 aa23.16■■□□□ 1.3
RAB40C-209ENST00000565511 NR1D1P20393 614 aa23.16■■□□□ 1.3
RAB40C-209ENST00000565511 PRLHRP49683 370 aa23.16■■□□□ 1.3
RAB40C-209ENST00000565511 CSRP3P50461 194 aa23.16■■□□□ 1.3
RAB40C-209ENST00000565511 VAV2P52735 878 aa23.16■■□□□ 1.3
RAB40C-209ENST00000565511 GDF10P55107 478 aa23.16■■□□□ 1.3
RAB40C-209ENST00000565511 DNTTIP2Q5QJE6 756 aaKnown RBP23.16■■□□□ 1.3
RAB40C-209ENST00000565511 KCTD11Q693B1 232 aa23.16■■□□□ 1.3
RAB40C-209ENST00000565511 PPP1R3BQ86XI6 285 aa23.16■■□□□ 1.3
RAB40C-209ENST00000565511 NXPE1Q8N323 547 aa23.16■■□□□ 1.3
RAB40C-209ENST00000565511 SIDT2Q8NBJ9 832 aaKnown RBP23.16■■□□□ 1.3
RAB40C-209ENST00000565511 UBXN4Q92575 508 aa23.16■■□□□ 1.3
RAB40C-209ENST00000565511 LINC00615Q96LM1 132 aaPredicted RBP23.16■■□□□ 1.3
RAB40C-209ENST00000565511 EPN3Q9H201 632 aa23.16■■□□□ 1.3
RAB40C-209ENST00000565511 KIR3DX1Q9H7L2 352 aa23.16■■□□□ 1.3
RAB40C-209ENST00000565511 ARNT2Q9HBZ2 717 aa23.16■■□□□ 1.3
RAB40C-209ENST00000565511 PIH1D1Q9NWS0 290 aaKnown RBP23.16■■□□□ 1.3
RAB40C-209ENST00000565511 CRLS1Q9UJA2 301 aa23.16■■□□□ 1.3
RAB40C-209ENST00000565511 OR6C74A6NCV1 312 aa23.15■■□□□ 1.3
RAB40C-209ENST00000565511 TLCD2A6NGC4 264 aa23.15■■□□□ 1.3
RAB40C-209ENST00000565511 K7EM74 188 aa23.15■■□□□ 1.3
RAB40C-209ENST00000565511 DDX3YO15523 660 aaKnown RBP23.15■■□□□ 1.3
RAB40C-209ENST00000565511 KPNA2P52292 529 aaKnown RBP23.15■■□□□ 1.3
RAB40C-209ENST00000565511 TLE1Q04724 770 aa23.15■■□□□ 1.3
RAB40C-209ENST00000565511 ERV3-1Q14264 604 aa23.15■■□□□ 1.3
RAB40C-209ENST00000565511 PRPSAP1Q14558 356 aa23.15■■□□□ 1.3
RAB40C-209ENST00000565511 CAPRIN2Q6IMN6 1127 aaKnown RBP23.15■■□□□ 1.3
RAB40C-209ENST00000565511 ABHD17AQ96GS6 310 aa23.15■■□□□ 1.3
RAB40C-209ENST00000565511 HRASLS2Q9NWW9 162 aa23.15■■□□□ 1.3
RAB40C-209ENST00000565511 KATNA1O75449 491 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 CRTAMO95727 393 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 FTCDO95954 541 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 NTRK1P04629 796 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 SLC35G4P0C7Q5 338 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 TPH1P17752 444 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 MC4RP32245 332 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 DNASE1L3Q13609 305 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 GPR19Q15760 415 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 CRTC2Q53ET0 693 aaPredicted RBP23.14■■□□□ 1.29
RAB40C-209ENST00000565511 GAS2L3Q86XJ1 694 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 CFAP206Q8IYR0 622 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 TAB3Q8N5C8 712 aaPredicted RBP23.14■■□□□ 1.29
RAB40C-209ENST00000565511 FAM71DQ8N9W8 422 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 C9orf43Q8TAL5 461 aaPredicted RBP23.14■■□□□ 1.29
RAB40C-209ENST00000565511 HM13Q8TCT9 377 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 APOBEC4Q8WW27 367 aaKnown RBP23.14■■□□□ 1.29
RAB40C-209ENST00000565511 DESI2Q9BSY9 194 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 LHX9Q9NQ69 397 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 FGF21Q9NSA1 209 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 RARRES3Q9UL19 164 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 ACSL5Q9ULC5 683 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 KCNMB2Q9Y691 235 aa23.14■■□□□ 1.29
RAB40C-209ENST00000565511 TNRC6AQ8NDV7 1962 aaKnown RBP23.13■■□□□ 1.29
RAB40C-209ENST00000565511 IGLV3-16A0A075B6K0 115 aa23.13■■□□□ 1.29
RAB40C-209ENST00000565511 TRBV5-4A0A0C4DH59 114 aa23.13■■□□□ 1.29
RAB40C-209ENST00000565511 STK10O94804 968 aaKnown RBP23.13■■□□□ 1.29
RAB40C-209ENST00000565511 TJP3O95049 919 aa23.13■■□□□ 1.29
RAB40C-209ENST00000565511 RPS18P62269 152 aaKnown RBP23.13■■□□□ 1.29
RAB40C-209ENST00000565511 MC1RQ01726 317 aa23.13■■□□□ 1.29
RAB40C-209ENST00000565511 KLF1Q13351 362 aaPredicted RBP23.13■■□□□ 1.29
RAB40C-209ENST00000565511 PRAMEF17Q5VTA0 474 aa23.13■■□□□ 1.29
RAB40C-209ENST00000565511 FAM199XQ6PEV8 388 aaPredicted RBP23.13■■□□□ 1.29
RAB40C-209ENST00000565511 SNX20Q7Z614 316 aa23.13■■□□□ 1.29
RAB40C-209ENST00000565511 OOSP2Q86WS3 158 aa23.13■■□□□ 1.29
RAB40C-209ENST00000565511 D2HGDHQ8N465 521 aa23.13■■□□□ 1.29
RAB40C-209ENST00000565511 MED13Q9UHV7 2174 aa23.13■■□□□ 1.29
RAB40C-209ENST00000565511 POLR2CP19387 275 aaPredicted RBP23.12■■□□□ 1.29
RAB40C-209ENST00000565511 ITGALP20701 1170 aa23.12■■□□□ 1.29
RAB40C-209ENST00000565511 PDHA2P29803 388 aa23.12■■□□□ 1.29
RAB40C-209ENST00000565511 LAMB3Q13751 1172 aa23.12■■□□□ 1.29
RAB40C-209ENST00000565511 KLHL35Q6PF15 583 aa23.12■■□□□ 1.29
RAB40C-209ENST00000565511 PIANPQ8IYJ0 282 aa23.12■■□□□ 1.29
RAB40C-209ENST00000565511 ULK4Q96C45 1275 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms