RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 MC4RP32245 332 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 CAPZBP47756 277 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 CDKN1CP49918 316 aaPredicted RBP6.26□□□□□ -1.41
TCF4-228ENST00000565393 VAV2P52735 878 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 PPP1CAP62136 330 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 RPS15P62841 145 aaKnown RBP6.26□□□□□ -1.41
TCF4-228ENST00000565393 XIAPP98170 497 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 CDC20Q12834 499 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 MAP7Q14244 749 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 BRD3Q15059 726 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 SKIDA1Q1XH10 827 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 GPR33Q49SQ1 333 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.26□□□□□ -1.41
TCF4-228ENST00000565393 DENND5AQ6IQ26 1287 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 PWWP2BQ6NUJ5 590 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 DUS1LQ6P1R4 473 aaKnown RBP6.26□□□□□ -1.41
TCF4-228ENST00000565393 FAM199XQ6PEV8 388 aaPredicted RBP6.26□□□□□ -1.41
TCF4-228ENST00000565393 FBXO38Q6PIJ6 1188 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 CERS6Q6ZMG9 384 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 PRSS42Q7Z5A4 293 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 SNX20Q7Z614 316 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 BPHLQ86WA6 291 aaPredicted RBP6.26□□□□□ -1.41
TCF4-228ENST00000565393 OOSP2Q86WS3 158 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 KMT5CQ86Y97 462 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 TMEM126BQ8IUX1 230 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 NXPE1Q8N323 547 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 DNAAF3Q8N9W5 541 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 SPC24Q8NBT2 197 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 GPR150Q8NGU9 434 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 C9orf43Q8TAL5 461 aaPredicted RBP6.26□□□□□ -1.41
TCF4-228ENST00000565393 LCN9Q8WX39 176 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 ALG3Q92685 438 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 CLIP3Q96DZ5 547 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 GORASP1Q9BQQ3 440 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 TMEM121Q9BTD3 319 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 SLC7A5P2Q9GIP4 190 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 SRMSQ9H3Y6 488 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 ARNT2Q9HBZ2 717 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 FGF21Q9NSA1 209 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 SOHLH2Q9NX45 425 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 SIDT1Q9NXL6 827 aaKnown RBP6.26□□□□□ -1.41
TCF4-228ENST00000565393 ZDHHC3Q9NYG2 299 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 SMARCAL1Q9NZC9 954 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 FEZ2Q9UHY8 353 aaPredicted RBP6.26□□□□□ -1.41
TCF4-228ENST00000565393 SLC24A2Q9UI40 661 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 SERTAD3Q9UJW9 196 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 PACSIN2Q9UNF0 486 aaPredicted RBP6.26□□□□□ -1.41
TCF4-228ENST00000565393 HEBP2Q9Y5Z4 205 aa6.26□□□□□ -1.41
TCF4-228ENST00000565393 PKD1L2Q7Z442 2459 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 C17orf113A0A1B0GUU1 675 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 CCDC78A2IDD5 438 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 GSAPA4D1B5 854 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 GRID2IPA4D2P6 1211 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 SLC9B1P1A6NJY1 282 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 MIF4GDA9UHW6 222 aaKnown RBP6.25□□□□□ -1.41
TCF4-228ENST00000565393 E7EVH7 732 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 MKRN2OSH3BPM6 223 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 LDB2O43679 373 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 CREG1O75629 220 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 SCRG1O75711 98 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 TIAF1O95411 115 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 ZBTB11O95625 1053 aaPredicted RBP6.25□□□□□ -1.41
TCF4-228ENST00000565393 ATXN8OSP0DMR3 200 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 CDH3P22223 829 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 STIP1P31948 543 aaKnown RBP6.25□□□□□ -1.41
TCF4-228ENST00000565393 PTPN7P35236 360 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 PREPP48147 710 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 CCL11P51671 97 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 TLE1Q04724 770 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 PRKG2Q13237 762 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 DNASE1L3Q13609 305 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 POU6F1Q14863 301 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 GPR19Q15760 415 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 BCL7AQ4VC05 210 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 COLEC12Q5KU26 742 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 CAPRIN2Q6IMN6 1127 aaKnown RBP6.25□□□□□ -1.41
TCF4-228ENST00000565393 LINC00523Q86TU6 105 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 TMEM135Q86UB9 458 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 HOOK3Q86VS8 718 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 SERPINA9Q86WD7 417 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 LILRA3Q8N6C8 439 aaPredicted RBP6.25□□□□□ -1.41
TCF4-228ENST00000565393 CLDN19Q8N6F1 224 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 TEX19Q8NA77 164 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 ACVR1CQ8NER5 493 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 HM13Q8TCT9 377 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 CT55Q8WUE5 264 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 STYXQ8WUJ0 223 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 TFGQ92734 400 aaPredicted RBP6.25□□□□□ -1.41
TCF4-228ENST00000565393 MR1Q95460 341 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 CDKN2AIPNLQ96HQ2 116 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 SLC41A2Q96JW4 573 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 DNAJC1Q96KC8 554 aaKnown RBP6.25□□□□□ -1.41
TCF4-228ENST00000565393 LINC00615Q96LM1 132 aaPredicted RBP6.25□□□□□ -1.41
TCF4-228ENST00000565393 FCRL4Q96PJ5 515 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 CD180Q99467 661 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 TTC1Q99614 292 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 XKR8Q9H6D3 395 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 KIR3DX1Q9H7L2 352 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 LRRC40Q9H9A6 602 aa6.25□□□□□ -1.41
TCF4-228ENST00000565393 VPS37BQ9H9H4 285 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms