RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 A6NCN8 305 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 PRR19A6NJB7 356 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 OR52A4PA6NMU1 304 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 S1PR4O95977 384 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 MT-CO3P00414 261 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 RPLP0P05388 317 aaKnown RBP15.65■□□□□ 0.1
RAB40C-208ENST00000564703 BRAFP15056 766 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 ITGB6P18564 788 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 CHRM3P20309 590 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 SLC19A1P41440 591 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 CARSP49589 748 aaKnown RBP15.65■□□□□ 0.1
RAB40C-208ENST00000564703 CCL7P80098 99 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 FOXK2Q01167 660 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 BOP1Q14137 746 aaKnown RBP15.65■□□□□ 0.1
RAB40C-208ENST00000564703 CLCA4Q14CN2 919 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 TMED2Q15363 201 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 TRADDQ15628 312 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 OTOAQ7RTW8 1153 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 IFT20Q8IY31 132 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 OR10G6Q8NH81 332 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 P2RY12Q9H244 342 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 POT1Q9NUX5 634 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 IMP3Q9NV31 184 aaKnown RBP15.65■□□□□ 0.1
RAB40C-208ENST00000564703 SCHIP1Q9P0W5 487 aaPredicted RBP15.65■□□□□ 0.1
RAB40C-208ENST00000564703 ZNF624Q9P2J8 865 aaPredicted RBP15.65■□□□□ 0.1
RAB40C-208ENST00000564703 DMGDHQ9UI17 866 aaKnown RBP15.65■□□□□ 0.1
RAB40C-208ENST00000564703 CLCA2Q9UQC9 943 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 WDR37Q9Y2I8 494 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 UNC13CQ8NB66 2214 aa15.65■□□□□ 0.1
RAB40C-208ENST00000564703 E5RI56 91 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 HYAL3O43820 417 aaPredicted RBP15.64■□□□□ 0.09
RAB40C-208ENST00000564703 TCEA3O75764 348 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 PKMP14618 531 aaKnown RBP15.64■□□□□ 0.09
RAB40C-208ENST00000564703 NDUFS1P28331 727 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 CD151P48509 253 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 ADARP55265 1226 aaKnown RBP15.64■□□□□ 0.09
RAB40C-208ENST00000564703 OR1D5P58170 312 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 INSM1Q01101 510 aaPredicted RBP15.64■□□□□ 0.09
RAB40C-208ENST00000564703 HSPA14Q0VDF9 509 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 RPE65Q16518 533 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 AMZ1Q400G9 498 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.64■□□□□ 0.09
RAB40C-208ENST00000564703 HES3Q5TGS1 186 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 TMPRSS7Q7RTY8 843 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 ZNF438Q7Z4V0 828 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 SPRED1Q7Z699 444 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 PIM3Q86V86 326 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 DENND6AQ8IWF6 608 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 UNC5BQ8IZJ1 945 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 SEC14L1Q92503 715 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 LPGAT1Q92604 370 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 DEPDC7Q96QD5 511 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 FERD3LQ96RJ6 166 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 INSM2Q96T92 566 aaPredicted RBP15.64■□□□□ 0.09
RAB40C-208ENST00000564703 PHACTR1Q9C0D0 580 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 ZMYND15Q9H091 742 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 FBXO6Q9NRD1 293 aaPredicted RBP15.64■□□□□ 0.09
RAB40C-208ENST00000564703 RABGEF1Q9UJ41 708 aa15.64■□□□□ 0.09
RAB40C-208ENST00000564703 IQCF5A8MTL0 148 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 TMX2-CTNND1H3BSU7 103 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 B4GAT1O43505 415 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 GSTA2P09210 222 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 MTHFD1P11586 935 aaKnown RBP15.63■□□□□ 0.09
RAB40C-208ENST00000564703 AMD1P17707 334 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 CCR7P32248 378 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 DEKP35659 375 aaKnown RBP15.63■□□□□ 0.09
RAB40C-208ENST00000564703 SLC1A2P43004 574 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 MAGEA4P43358 317 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 CSE1LP55060 971 aaKnown RBP15.63■□□□□ 0.09
RAB40C-208ENST00000564703 UBE2IP63279 158 aaKnown RBP15.63■□□□□ 0.09
RAB40C-208ENST00000564703 GPLD1P80108 840 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 MGAT5Q09328 741 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 FRG1Q14331 258 aaKnown RBP15.63■□□□□ 0.09
RAB40C-208ENST00000564703 FASTKD3Q14CZ7 662 aaKnown RBP15.63■□□□□ 0.09
RAB40C-208ENST00000564703 STEAP4Q687X5 459 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 CAPRIN2Q6IMN6 1127 aaKnown RBP15.63■□□□□ 0.09
RAB40C-208ENST00000564703 ZDHHC24Q6UX98 284 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 RBM44Q6ZP01 1051 aaKnown RBP15.63■□□□□ 0.09
RAB40C-208ENST00000564703 KIAA0408Q6ZU52 694 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 C3orf62Q6ZUJ4 267 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 TMEM26Q6ZUK4 368 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 USP53Q70EK8 1073 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 KRT222Q8N1A0 295 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 CACTIN-AS1Q8N1I8 211 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 LILRA3Q8N6C8 439 aaPredicted RBP15.63■□□□□ 0.09
RAB40C-208ENST00000564703 ZFPM2Q8WW38 1151 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 CDKL2Q92772 493 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 BIRC8Q96P09 236 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 SCNM1Q9BWG6 230 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 L2HGDHQ9H9P8 463 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 UCK1Q9HA47 277 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 SLC40A1Q9NP59 571 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 ZFATQ9P243 1243 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 CFAP20Q9Y6A4 193 aaKnown RBP15.63■□□□□ 0.09
RAB40C-208ENST00000564703 COMMD10Q9Y6G5 202 aa15.63■□□□□ 0.09
RAB40C-208ENST00000564703 MED19A0JLT2 244 aaPredicted RBP15.62■□□□□ 0.09
RAB40C-208ENST00000564703 HAUS5O94927 633 aa15.62■□□□□ 0.09
RAB40C-208ENST00000564703 CPNE6O95741 557 aa15.62■□□□□ 0.09
RAB40C-208ENST00000564703 RHOXF2BP0C7M4 288 aa15.62■□□□□ 0.09
RAB40C-208ENST00000564703 AOAHP28039 575 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms