RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 LILRA3Q8N6C8 439 aaPredicted RBP17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 CLDN19Q8N6F1 224 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 GPR150Q8NGU9 434 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 OR4L1Q8NH43 312 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 ZFPM2Q8WW38 1151 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 PEX13Q92968 403 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 ZDHHC12Q96GR4 267 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 C9orf72Q96LT7 481 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 ZNF778Q96MU6 729 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 FCRL3Q96P31 734 aaPredicted RBP17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 OSBPL9Q96SU4 736 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 PRORYQ9H606 182 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 CHRAC1Q9NRG0 131 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 FOXJ2Q9P0K8 574 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 PCDHB11Q9Y5F2 797 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 HEBP2Q9Y5Z4 205 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 COLEC10Q9Y6Z7 277 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 BPTFQ12830 3046 aa17.94■□□□□ 0.46
SYNGR3-204ENST00000564642 B4E171 279 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 RASSF9O75901 435 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 KRT14P02533 472 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 C9P02748 559 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 GSTM1P09488 218 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 PPARGP37231 505 aaPredicted RBP17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 TSPAN7P41732 249 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 CAPZBP47756 277 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 VPS41P49754 854 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 TERF1P54274 439 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 GFERP55789 205 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 RAB15P59190 212 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 SARNPP82979 210 aaKnown RBP17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 GSTM4Q03013 218 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 ACVR1Q04771 509 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 GPS1Q13098 491 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 FASTKD1Q53R41 847 aaKnown RBP17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 DCAF12Q5T6F0 453 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 IRGCQ6NXR0 463 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 TTC27Q6P3X3 843 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 CERS6Q6ZMG9 384 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 GPR155Q7Z3F1 870 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 ZFAND4Q86XD8 727 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 SPDYE1Q8NFV5 336 aaPredicted RBP17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 RSC1A1Q92681 617 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 DDA1Q9BW61 102 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 ASPSCR1Q9BZE9 553 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 IL22Q9GZX6 179 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 COG4Q9H9E3 785 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 CPNE5Q9HCH3 593 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 ANAPC5Q9UJX4 755 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 PCDHGA3Q9Y5H0 932 aa17.93■□□□□ 0.46
SYNGR3-204ENST00000564642 GOLGA6L10A0A0M3HER8 536 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 CYSRT1A8MQ03 144 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 F8W8V4 182 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 IFRD1O00458 451 aaPredicted RBP17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 TOX3O15405 576 aaPredicted RBP17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 FTH1P02794 183 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 TPSB2P20231 275 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 NDUFS1P28331 727 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 COILP38432 576 aaPredicted RBP17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 CRADDP78560 199 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 MC2RQ01718 297 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 TPSAB1Q15661 275 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 CAPRIN2Q6IMN6 1127 aaKnown RBP17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 DUS1LQ6P1R4 473 aaKnown RBP17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 LRRC8BQ6P9F7 803 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 CCDC137Q6PK04 289 aaKnown RBP17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 PACS1Q6VY07 963 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 CCDC81Q6ZN84 652 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 ACTRT1Q8TDG2 376 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 COG1Q8WTW3 980 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 JPH3Q8WXH2 748 aaPredicted RBP17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 PDLIM2Q96JY6 352 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 CCNL2Q96S94 520 aaPredicted RBP17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 RAB33BQ9H082 229 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 EPHA6Q9UF33 1036 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 SNX12Q9UMY4 172 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 B3GALT1Q9Y5Z6 326 aa17.92■□□□□ 0.46
SYNGR3-204ENST00000564642 LAMA5O15230 3695 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 CELSR3Q9NYQ7 3312 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 STMND1H3BQB6 276 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 CES2O00748 559 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 ANKRD34CP0C6C1 535 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 OR56A5P0C7T3 313 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 LEPRP48357 1165 aaKnown RBP17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 SEPHS1P49903 392 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 RPA4Q13156 261 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 TGIF1Q15583 401 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 CYP1B1Q16678 543 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 KCTD19Q17RG1 926 aaPredicted RBP17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 ARHGAP40Q5TG30 622 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 CACHD1Q5VU97 1274 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 ARMC6Q6NXE6 501 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 XKR5Q6UX68 686 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 CEACAM20Q6UY09 585 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 FAM92BQ6ZTR7 304 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 BMPERQ8N8U9 685 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 GRK7Q8WTQ7 553 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 SGSM3Q96HU1 749 aa17.91■□□□□ 0.46
SYNGR3-204ENST00000564642 RMDN2Q96LZ7 410 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms