RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 ARL5AQ9Y689 179 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 SBF1O95248 1867 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 ELOVL7A1L3X0 281 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 SLC38A8A6NNN8 435 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 SOCS2O14508 198 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 EI24O14681 340 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 SLC16A5O15375 505 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 E2F6O75461 281 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 MYO1DO94832 1006 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 OR6B1O95007 311 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 PRSS23O95084 383 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 CPNE6O95741 557 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 CST1P01037 141 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 IGHA2P01877 340 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 ASGR1P07306 291 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 C8GP07360 202 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 ALOX5P09917 674 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 CCDC159P0C7I6 412 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 MBL2P11226 248 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-249ENST00000564606 CDK4P11802 303 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 CKMT2P17540 419 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 GGT1P19440 569 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 ATP6V1B2P21281 511 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 FGFR3P22607 806 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 SLC5A2P31639 672 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 GRK3P35626 688 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 HMGCLP35914 325 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 ARSDP51689 593 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 ZNF157P51786 506 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-249ENST00000564606 PNLIPRP1P54315 467 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 HUNKP57058 714 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 CXCR4P61073 352 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 CREMQ03060 361 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 SP140Q13342 867 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 KCNC3Q14003 757 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 SEMA3AQ14563 771 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 ZNF846Q147U1 533 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 OR4D1Q15615 310 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 TSNQ15631 228 aaKnown RBP7.52□□□□□ -1.21
ATXN3-249ENST00000564606 DDR2Q16832 855 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 PAN2Q504Q3 1202 aaKnown RBP7.52□□□□□ -1.21
ATXN3-249ENST00000564606 ALFQ53S48 1182 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 ZNF789Q5FWF6 425 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 ADGRF1Q5T601 910 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 FAM171A1Q5VUB5 890 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 TPGS2Q68CL5 300 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 HMBOX1Q6NT76 420 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 CYP20A1Q6UW02 462 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 KCTD8Q6ZWB6 473 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 USP51Q70EK9 711 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 SNX20Q7Z614 316 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 IFNEQ86WN2 208 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 CMTR2Q8IYT2 770 aaKnown RBP7.52□□□□□ -1.21
ATXN3-249ENST00000564606 HJURPQ8NCD3 748 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-249ENST00000564606 LPCAT1Q8NF37 534 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 OR13C4Q8NGS5 318 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 BPIFB1Q8TDL5 484 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 CSGALNACT1Q8TDX6 532 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 UBTD2Q8WUN7 234 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 TRUB1Q8WWH5 349 aaKnown RBP7.52□□□□□ -1.21
ATXN3-249ENST00000564606 SLC13A3Q8WWT9 602 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 ATL1Q8WXF7 558 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 IGSF8Q969P0 613 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 ACDQ96AP0 544 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 CCDC97Q96F63 343 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-249ENST00000564606 COX4I2Q96KJ9 171 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 ZNF512Q96ME7 567 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-249ENST00000564606 SEPT5Q99719 369 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-249ENST00000564606 SLC29A1Q99808 456 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 EGFL8Q99944 293 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 TTPALQ9BTX7 342 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 HTATIP2Q9BUP3 242 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 THUMPD3Q9BV44 507 aaKnown RBP7.52□□□□□ -1.21
ATXN3-249ENST00000564606 NTMT1Q9BV86 223 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 POLR1BQ9H9Y6 1135 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 PRM3Q9NNZ6 103 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 NDFIP2Q9NV92 336 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 POLR3BQ9NW08 1133 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-249ENST00000564606 DUS2Q9NX74 493 aaKnown RBP7.52□□□□□ -1.21
ATXN3-249ENST00000564606 KCTD5Q9NXV2 234 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 WWOXQ9NZC7 414 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 MARCH4Q9P2E8 410 aaPredicted RBP7.52□□□□□ -1.21
ATXN3-249ENST00000564606 EGFL7Q9UHF1 273 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 PSME2Q9UL46 239 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 INVSQ9Y283 1065 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 RAI2Q9Y5P3 530 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 PATJQ8NI35 1801 aa7.52□□□□□ -1.21
ATXN3-249ENST00000564606 SERTM1A2A2V5 107 aa7.51□□□□□ -1.21
ATXN3-249ENST00000564606 MTMR11A4FU01 709 aa7.51□□□□□ -1.21
ATXN3-249ENST00000564606 NPEPPSL1A6NEC2 478 aa7.51□□□□□ -1.21
ATXN3-249ENST00000564606 FAM220BPB1ANY3 271 aa7.51□□□□□ -1.21
ATXN3-249ENST00000564606 H0Y626 953 aa7.51□□□□□ -1.21
ATXN3-249ENST00000564606 K7EPI3 171 aa7.51□□□□□ -1.21
ATXN3-249ENST00000564606 FXYD1O00168 92 aa7.51□□□□□ -1.21
ATXN3-249ENST00000564606 AURKAO14965 403 aa7.51□□□□□ -1.21
ATXN3-249ENST00000564606 SLC22A1O15245 554 aa7.51□□□□□ -1.21
ATXN3-249ENST00000564606 FFAR2O15552 330 aa7.51□□□□□ -1.21
ATXN3-249ENST00000564606 RSL1D1O76021 490 aaKnown RBP7.51□□□□□ -1.21
ATXN3-249ENST00000564606 CNTN5O94779 1100 aa7.51□□□□□ -1.21
ATXN3-249ENST00000564606 CCNDBP1O95273 360 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms