RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 SLC25A41Q8N5S1 370 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 ENDOVQ8N8Q3 282 aaKnown RBP13.74□□□□□ -0.21
CDR2-204ENST00000564542 OR2L2Q8NH16 312 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 BLOC1S5Q8TDH9 187 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 CPT1BQ92523 772 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 RNF25Q96BH1 459 aaPredicted RBP13.74□□□□□ -0.21
CDR2-204ENST00000564542 MRGPRX2Q96LB1 330 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 C12orf66Q96MD2 445 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 INSM2Q96T92 566 aaPredicted RBP13.74□□□□□ -0.21
CDR2-204ENST00000564542 WWP1Q9H0M0 922 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 DEF6Q9H4E7 631 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 KIR3DX1Q9H7L2 352 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 FANCEQ9HB96 536 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 DDX56Q9NY93 547 aaKnown RBP13.74□□□□□ -0.21
CDR2-204ENST00000564542 ACSL5Q9ULC5 683 aa13.74□□□□□ -0.21
CDR2-204ENST00000564542 G3BP2Q9UN86 482 aaKnown RBP13.74□□□□□ -0.21
CDR2-204ENST00000564542 OR6C74A6NCV1 312 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 MGAT4DA6NG13 374 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 MEN1O00255 615 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 DPM1O60762 260 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 TMEM63AO94886 807 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 PRAMEF1O95521 474 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 SLC35G4P0C7Q5 338 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 MSH3P20585 1137 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 RORAP35398 523 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 KPNA2P52292 529 aaKnown RBP13.73□□□□□ -0.21
CDR2-204ENST00000564542 ABRQ12979 859 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 PLEKHS1Q5SXH7 462 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 JMJD6Q6NYC1 403 aaPredicted RBP13.73□□□□□ -0.21
CDR2-204ENST00000564542 MFSD7Q6UXD7 560 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 RHOT2Q8IXI1 618 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 RHOT1Q8IXI2 618 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 Q8NA96 180 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 OXNAD1Q96HP4 312 aaPredicted RBP13.73□□□□□ -0.21
CDR2-204ENST00000564542 TLR10Q9BXR5 811 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 NLNQ9BYT8 704 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 IFNKQ9P0W0 207 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 KLHL8Q9P2G9 620 aaPredicted RBP13.73□□□□□ -0.21
CDR2-204ENST00000564542 SAE1Q9UBE0 346 aaPredicted RBP13.73□□□□□ -0.21
CDR2-204ENST00000564542 POMT2Q9UKY4 750 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 TCFL5Q9UL49 500 aa13.73□□□□□ -0.21
CDR2-204ENST00000564542 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.73□□□□□ -0.214e-7■■■■□ 19.6
CDR2-204ENST00000564542 MED13Q9UHV7 2174 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 MATN2O00339 956 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 BUD23O43709 281 aaKnown RBP13.72□□□□□ -0.21
CDR2-204ENST00000564542 AKR1B10O60218 316 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 MSL3P1P0C860 447 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 RNF224P0DH78 156 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 PYGMP11217 842 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 PECAM1P16284 738 aaPredicted RBP13.72□□□□□ -0.21
CDR2-204ENST00000564542 NDUFS1P28331 727 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 CDKN2BP42772 138 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 SLC1A1P43005 524 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 ARCN1P48444 511 aaKnown RBP13.72□□□□□ -0.21
CDR2-204ENST00000564542 VAV2P52735 878 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 PRKAA1Q13131 559 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 MPP3Q13368 585 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 TFDP2Q14188 446 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 INPP5JQ15735 1006 aaPredicted RBP13.72□□□□□ -0.21
CDR2-204ENST00000564542 TAZQ16635 292 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 BCL7AQ4VC05 210 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 PRR30Q53SZ7 412 aaPredicted RBP13.72□□□□□ -0.21
CDR2-204ENST00000564542 LCN10Q6JVE6 187 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 FAM198BQ6UWH4 519 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 DET1Q7L5Y6 550 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 FDCSPQ8NFU4 85 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 IPMKQ8NFU5 416 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 SPDYE1Q8NFV5 336 aaPredicted RBP13.72□□□□□ -0.21
CDR2-204ENST00000564542 ZNF398Q8TD17 642 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 LINC00615Q96LM1 132 aaPredicted RBP13.72□□□□□ -0.21
CDR2-204ENST00000564542 RMDN2Q96LZ7 410 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 PPM1MQ96MI6 270 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 FCRL5Q96RD9 977 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 VAT1Q99536 393 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 DNAJC7Q99615 494 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 NUDT9Q9BW91 350 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 SLC29A3Q9BZD2 475 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 SYTL2Q9HCH5 934 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 C1GALT1Q9NS00 363 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 COLEC10Q9Y6Z7 277 aa13.72□□□□□ -0.21
CDR2-204ENST00000564542 TCP11X1B4DZS4 312 aa13.71□□□□□ -0.21
CDR2-204ENST00000564542 F5H423 210 aaPredicted RBP13.71□□□□□ -0.21
CDR2-204ENST00000564542 GOLGA6L19H0YKK7 550 aa13.71□□□□□ -0.21
CDR2-204ENST00000564542 STX7O15400 261 aaKnown RBP13.71□□□□□ -0.21
CDR2-204ENST00000564542 CST8O60676 142 aa13.71□□□□□ -0.21
CDR2-204ENST00000564542 DDAH2O95865 285 aa13.71□□□□□ -0.21
CDR2-204ENST00000564542 POLR2CP19387 275 aaPredicted RBP13.71□□□□□ -0.21
CDR2-204ENST00000564542 CDH3P22223 829 aa13.71□□□□□ -0.21
CDR2-204ENST00000564542 VARSP26640 1264 aaKnown RBP13.71□□□□□ -0.21
CDR2-204ENST00000564542 ITGA1P56199 1179 aa13.71□□□□□ -0.21
CDR2-204ENST00000564542 ZNF789Q5FWF6 425 aa13.71□□□□□ -0.21
CDR2-204ENST00000564542 PRAMEF17Q5VTA0 474 aa13.71□□□□□ -0.21
CDR2-204ENST00000564542 SLC6A19Q695T7 634 aa13.71□□□□□ -0.21
CDR2-204ENST00000564542 FBXO38Q6PIJ6 1188 aa13.71□□□□□ -0.21
CDR2-204ENST00000564542 MED25Q71SY5 747 aa13.71□□□□□ -0.21
CDR2-204ENST00000564542 SYTL1Q8IYJ3 562 aa13.71□□□□□ -0.21
CDR2-204ENST00000564542 ZNF567Q8N184 647 aa13.71□□□□□ -0.21
CDR2-204ENST00000564542 TMEM102Q8N9M5 508 aaPredicted RBP13.71□□□□□ -0.21
CDR2-204ENST00000564542 PNPLA2Q96AD5 504 aa13.71□□□□□ -0.21
CDR2-204ENST00000564542 CLIP3Q96DZ5 547 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms