RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 ANKRD20A1Q5TYW2 823 aa23.3■■□□□ 1.32
NME3-206ENST00000564252 ANKRD20A3Q5VUR7 823 aa23.3■■□□□ 1.32
NME3-206ENST00000564252 BPHLQ86WA6 291 aaPredicted RBP23.3■■□□□ 1.32
NME3-206ENST00000564252 ZFPM2Q8WW38 1151 aa23.3■■□□□ 1.32
NME3-206ENST00000564252 LINC00615Q96LM1 132 aaPredicted RBP23.3■■□□□ 1.32
NME3-206ENST00000564252 AKIRIN1Q9H9L7 192 aaPredicted RBP23.3■■□□□ 1.32
NME3-206ENST00000564252 FGF21Q9NSA1 209 aa23.3■■□□□ 1.32
NME3-206ENST00000564252 FAM8A1Q9UBU6 413 aa23.3■■□□□ 1.32
NME3-206ENST00000564252 SLC24A2Q9UI40 661 aa23.3■■□□□ 1.32
NME3-206ENST00000564252 EFR3BQ9Y2G0 817 aa23.3■■□□□ 1.32
NME3-206ENST00000564252 AAR2Q9Y312 384 aaKnown RBP23.3■■□□□ 1.32
NME3-206ENST00000564252 UBA6A0AVT1 1052 aaPredicted RBP23.29■■□□□ 1.32
NME3-206ENST00000564252 CDC14CA4D256 554 aa23.29■■□□□ 1.32
NME3-206ENST00000564252 C21orf140B9A014 251 aa23.29■■□□□ 1.32
NME3-206ENST00000564252 PJA2O43164 708 aa23.29■■□□□ 1.32
NME3-206ENST00000564252 PTPN7P35236 360 aa23.29■■□□□ 1.32
NME3-206ENST00000564252 HSD11B2P80365 405 aa23.29■■□□□ 1.32
NME3-206ENST00000564252 OOSP2Q86WS3 158 aa23.29■■□□□ 1.32
NME3-206ENST00000564252 CDKL3Q8IVW4 592 aaPredicted RBP23.29■■□□□ 1.32
NME3-206ENST00000564252 D2HGDHQ8N465 521 aa23.29■■□□□ 1.32
NME3-206ENST00000564252 LILRA3Q8N6C8 439 aaPredicted RBP23.29■■□□□ 1.32
NME3-206ENST00000564252 OR13C4Q8NGS5 318 aa23.29■■□□□ 1.32
NME3-206ENST00000564252 RMDN2Q96LZ7 410 aa23.29■■□□□ 1.32
NME3-206ENST00000564252 FERMT1Q9BQL6 677 aa23.29■■□□□ 1.32
NME3-206ENST00000564252 OSBPL8Q9BZF1 889 aa23.29■■□□□ 1.32
NME3-206ENST00000564252 TRIM5Q9C035 493 aa23.29■■□□□ 1.32
NME3-206ENST00000564252 TWSG1Q9GZX9 223 aa23.29■■□□□ 1.32
NME3-206ENST00000564252 KIR3DX1Q9H7L2 352 aa23.29■■□□□ 1.32
NME3-206ENST00000564252 MACROD2A1Z1Q3 448 aa23.28■■□□□ 1.32
NME3-206ENST00000564252 PIPSLA2A3N6 862 aa23.28■■□□□ 1.32
NME3-206ENST00000564252 RCCD1A6NED2 376 aa23.28■■□□□ 1.32
NME3-206ENST00000564252 K7EM74 188 aa23.28■■□□□ 1.32
NME3-206ENST00000564252 NTRK1P04629 796 aa23.28■■□□□ 1.32
NME3-206ENST00000564252 SLC35G4P0C7Q5 338 aa23.28■■□□□ 1.32
NME3-206ENST00000564252 NR1D1P20393 614 aa23.28■■□□□ 1.32
NME3-206ENST00000564252 CYLC1P35663 651 aaPredicted RBP23.28■■□□□ 1.32
NME3-206ENST00000564252 ARL4DP49703 201 aa23.28■■□□□ 1.32
NME3-206ENST00000564252 EIF3EP60228 445 aaKnown RBP23.28■■□□□ 1.32
NME3-206ENST00000564252 IGFBP7Q16270 282 aa23.28■■□□□ 1.32
NME3-206ENST00000564252 COLEC12Q5KU26 742 aa23.28■■□□□ 1.32
NME3-206ENST00000564252 CAPRIN2Q6IMN6 1127 aaKnown RBP23.28■■□□□ 1.32
NME3-206ENST00000564252 RUFY1Q96T51 708 aa23.28■■□□□ 1.32
NME3-206ENST00000564252 FAM118BQ9BPY3 351 aa23.28■■□□□ 1.32
NME3-206ENST00000564252 ACTL8Q9H568 366 aa23.28■■□□□ 1.32
NME3-206ENST00000564252 LUC7LQ9NQ29 371 aaKnown RBP23.28■■□□□ 1.32
NME3-206ENST00000564252 NAV2Q8IVL1 2488 aa23.28■■□□□ 1.32
NME3-206ENST00000564252 LRRK2Q5S007 2527 aa23.28■■□□□ 1.32
NME3-206ENST00000564252 OR6C74A6NCV1 312 aa23.27■■□□□ 1.32
NME3-206ENST00000564252 MKRN2OSH3BPM6 223 aa23.27■■□□□ 1.32
NME3-206ENST00000564252 KCNN4O15554 427 aa23.27■■□□□ 1.32
NME3-206ENST00000564252 ZBTB11O95625 1053 aaPredicted RBP23.27■■□□□ 1.32
NME3-206ENST00000564252 RBP3P10745 1247 aa23.27■■□□□ 1.32
NME3-206ENST00000564252 PYGMP11217 842 aa23.27■■□□□ 1.32
NME3-206ENST00000564252 KPNA2P52292 529 aaKnown RBP23.27■■□□□ 1.32
NME3-206ENST00000564252 ZNF140P52738 457 aaPredicted RBP23.27■■□□□ 1.32
NME3-206ENST00000564252 PMS2P54278 862 aa23.27■■□□□ 1.32
NME3-206ENST00000564252 TUBB4BP68371 445 aa23.27■■□□□ 1.32
NME3-206ENST00000564252 TUBB2AQ13885 445 aa23.27■■□□□ 1.32
NME3-206ENST00000564252 PRPSAP1Q14558 356 aa23.27■■□□□ 1.32
NME3-206ENST00000564252 DENND5AQ6IQ26 1287 aa23.27■■□□□ 1.32
NME3-206ENST00000564252 TCTN3Q6NUS6 607 aa23.27■■□□□ 1.32
NME3-206ENST00000564252 FAM199XQ6PEV8 388 aaPredicted RBP23.27■■□□□ 1.32
NME3-206ENST00000564252 CCDC110Q8TBZ0 833 aa23.27■■□□□ 1.32
NME3-206ENST00000564252 TUBB2BQ9BVA1 445 aa23.27■■□□□ 1.32
NME3-206ENST00000564252 CRLS1Q9UJA2 301 aa23.27■■□□□ 1.32
NME3-206ENST00000564252 RFPL1O75677 317 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 CRTAMO95727 393 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 POLBP06746 335 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 CTNNA2P26232 953 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 ARCN1P48444 511 aaKnown RBP23.26■■□□□ 1.31
NME3-206ENST00000564252 PRLHRP49683 370 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 PDE1BQ01064 536 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 KLRB1Q12918 225 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 DARS2Q6PI48 645 aaKnown RBP23.26■■□□□ 1.31
NME3-206ENST00000564252 CFAP206Q8IYR0 622 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 CARFQ8N187 725 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 NXPE1Q8N323 547 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 HM13Q8TCT9 377 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 ULK4Q96C45 1275 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 ZNF501Q96CX3 271 aaPredicted RBP23.26■■□□□ 1.31
NME3-206ENST00000564252 DCUN1D1Q96GG9 259 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 PPM1MQ96MI6 270 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 SPATA13Q96N96 652 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 C19orf43Q9BQ61 176 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 FAM96AQ9H5X1 160 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 MAN2B2Q9Y2E5 1009 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 DUSP10Q9Y6W6 482 aa23.26■■□□□ 1.31
NME3-206ENST00000564252 DOPEY2Q9Y3R5 2298 aa23.25■■□□□ 1.31
NME3-206ENST00000564252 STK10O94804 968 aaKnown RBP23.25■■□□□ 1.31
NME3-206ENST00000564252 RALBP11234 206 aa23.25■■□□□ 1.31
NME3-206ENST00000564252 RPS18P62269 152 aaKnown RBP23.25■■□□□ 1.31
NME3-206ENST00000564252 TMPRSS15P98073 1019 aa23.25■■□□□ 1.31
NME3-206ENST00000564252 LAMB3Q13751 1172 aa23.25■■□□□ 1.31
NME3-206ENST00000564252 GPR19Q15760 415 aa23.25■■□□□ 1.31
NME3-206ENST00000564252 ARMC6Q6NXE6 501 aa23.25■■□□□ 1.31
NME3-206ENST00000564252 AADACL2Q6P093 401 aa23.25■■□□□ 1.31
NME3-206ENST00000564252 SNX20Q7Z614 316 aa23.25■■□□□ 1.31
NME3-206ENST00000564252 APLFQ8IW19 511 aaPredicted RBP23.25■■□□□ 1.31
NME3-206ENST00000564252 KLHDC8BQ8IXV7 354 aa23.25■■□□□ 1.31
NME3-206ENST00000564252 CALR3Q96L12 384 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms