RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 HHATLQ9HCP6 504 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 TRPC7Q9HCX4 862 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 MIOSQ9NXC5 875 aa5.33□□□□□ -1.56
LINC00557-201ENST00000563184 SCN5AQ14524 2016 aa5.32□□□□□ -1.56
LINC00557-201ENST00000563184 TRBC2A0A5B9 178 aa5.32□□□□□ -1.56
LINC00557-201ENST00000563184 KRTAP29-1A8MX34 341 aaPredicted RBP5.32□□□□□ -1.56
LINC00557-201ENST00000563184 GPR137BO60478 399 aa5.32□□□□□ -1.56
LINC00557-201ENST00000563184 TBX10O75333 385 aa5.32□□□□□ -1.56
LINC00557-201ENST00000563184 CAPZA2P47755 286 aa5.32□□□□□ -1.56
LINC00557-201ENST00000563184 HNRNPKP61978 463 aaKnown RBP eCLIP5.32□□□□□ -1.56
LINC00557-201ENST00000563184 CDK3Q00526 305 aa5.32□□□□□ -1.56
LINC00557-201ENST00000563184 PRKAA1Q13131 559 aa5.32□□□□□ -1.56
LINC00557-201ENST00000563184 PRPF4BQ13523 1007 aaKnown RBP5.32□□□□□ -1.56
LINC00557-201ENST00000563184 CRY2Q49AN0 593 aa5.32□□□□□ -1.56
LINC00557-201ENST00000563184 ZNF771Q7L3S4 317 aaPredicted RBP5.32□□□□□ -1.56
LINC00557-201ENST00000563184 PIWIL4Q7Z3Z4 852 aaKnown RBP5.32□□□□□ -1.56
LINC00557-201ENST00000563184 CAMKMTQ7Z624 323 aa5.32□□□□□ -1.56
LINC00557-201ENST00000563184 PTOV1Q86YD1 416 aa5.32□□□□□ -1.56
LINC00557-201ENST00000563184 SPACA9Q96E40 222 aaPredicted RBP5.32□□□□□ -1.56
LINC00557-201ENST00000563184 LINC00615Q96LM1 132 aaPredicted RBP5.32□□□□□ -1.56
LINC00557-201ENST00000563184 MOV10L1Q9BXT6 1211 aaKnown RBP5.32□□□□□ -1.56
LINC00557-201ENST00000563184 DPAGT1Q9H3H5 408 aa5.32□□□□□ -1.56
LINC00557-201ENST00000563184 OSER1Q9NX31 292 aa5.32□□□□□ -1.56
LINC00557-201ENST00000563184 GIMAP2Q9UG22 337 aa5.32□□□□□ -1.56
LINC00557-201ENST00000563184 GREB1LQ9C091 1923 aaPredicted RBP5.31□□□□□ -1.56
LINC00557-201ENST00000563184 A0A1W2PS18 150 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 OR10H2O60403 315 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 LDLRP01130 860 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 TFAP2AP05549 437 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 LIPFP07098 398 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 KRT19P08727 400 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 ZNF23P17027 643 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 MCCP23508 829 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 DGKAP23743 735 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 CPT2P23786 658 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 TKTP29401 623 aaKnown RBP5.31□□□□□ -1.56
LINC00557-201ENST00000563184 ERVFC1-1P60608 527 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 ZNF628Q5EBL2 1059 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 GRTP1Q5TC63 336 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 KIAA1161Q6NSJ0 714 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 POC1AQ8NBT0 407 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 PAPD5Q8NDF8 572 aaKnown RBP5.31□□□□□ -1.56
LINC00557-201ENST00000563184 TEKT4Q8WW24 435 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 MS4A10Q96PG2 267 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 ABHD6Q9BV23 337 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 ANKRD2Q9GZV1 360 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 OR10A4Q9H209 315 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 ZNF556Q9HAH1 456 aa5.31□□□□□ -1.56
LINC00557-201ENST00000563184 CCDC177Q9NQR7 707 aaPredicted RBP5.31□□□□□ -1.56
LINC00557-201ENST00000563184 A0A1W2PPM1 405 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 ANKUB1A6NFN9 424 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 URADA6NGE7 173 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 C15orf62A8K5M9 175 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 A8MXE2 369 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 XRCC3O43542 346 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 DKC1O60832 514 aaKnown RBP eCLIP5.3□□□□□ -1.56
LINC00557-201ENST00000563184 MED24O75448 989 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 TADA2AO75478 443 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 PDE9AO76083 593 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 C22orf31O95567 290 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 CSF2RAP15509 400 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 CBLP22681 906 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 MC5RP33032 325 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 IL15P40933 162 aaPredicted RBP5.3□□□□□ -1.56
LINC00557-201ENST00000563184 PITX1P78337 314 aaPredicted RBP5.3□□□□□ -1.56
LINC00557-201ENST00000563184 NR1D2Q14995 579 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 LETM2Q2VYF4 491 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 SIRPB2Q5JXA9 342 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 RNASEH2BQ5TBB1 312 aaKnown RBP5.3□□□□□ -1.56
LINC00557-201ENST00000563184 NDUFAF5Q5TEU4 345 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 ZNF852Q6ZMS4 543 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 RBPMS2Q6ZRY4 209 aaKnown RBP5.3□□□□□ -1.56
LINC00557-201ENST00000563184 FOXL2NBQ6ZUU3 175 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 KCTD8Q6ZWB6 473 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 TMEM173Q86WV6 379 aaPredicted RBP5.3□□□□□ -1.56
LINC00557-201ENST00000563184 CEP57L1Q8IYX8 460 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 DAZLQ92904 295 aaKnown RBP5.3□□□□□ -1.56
LINC00557-201ENST00000563184 ABHD8Q96I13 439 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 RADILQ96JH8 1075 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 RETREG1Q9H6L5 497 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 ANKZF1Q9H8Y5 726 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 FKRPQ9H9S5 495 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 TBC1D17Q9HA65 648 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 EQTNQ9NQ60 294 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 ABCF3Q9NUQ8 709 aa5.3□□□□□ -1.56
LINC00557-201ENST00000563184 PRMT7Q9NVM4 692 aaPredicted RBP5.3□□□□□ -1.56
LINC00557-201ENST00000563184 A0A0B4J293 547 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 DENND3A2RUS2 1198 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 TMEM221A6NGB7 291 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 SYNGR3O43761 229 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 CTSVO60911 334 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 SLCO2B1O94956 709 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 BAG4O95429 457 aaKnown RBP5.29□□□□□ -1.56
LINC00557-201ENST00000563184 TRUB2O95900 331 aaKnown RBP5.29□□□□□ -1.56
LINC00557-201ENST00000563184 IGHV4-39P01824 125 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 NR1D1P20393 614 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 MATR3P43243 847 aaKnown RBP eCLIP5.29□□□□□ -1.56
LINC00557-201ENST00000563184 MLLT10P55197 1068 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 PLA2G7Q13093 441 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 C6orf163Q5TEZ5 329 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms