RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 SNX1Q13596 522 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 LINC00303Q3SY05 128 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 GPR33Q49SQ1 333 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 CCDC38Q502W7 563 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 TAS2R42Q7RTR8 314 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 CFAP206Q8IYR0 622 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 UNC5BQ8IZJ1 945 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 MED8Q96G25 268 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 ZDHHC12Q96GR4 267 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 ELMO2Q96JJ3 720 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 OR6C1Q96RD1 312 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 ZPBPQ9BS86 351 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 SLC12A9Q9BXP2 914 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 LZTFL1Q9NQ48 299 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 EPHA6Q9UF33 1036 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 ACSL5Q9ULC5 683 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 TMEM184BQ9Y519 407 aaPredicted RBP16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 TNRC6AQ8NDV7 1962 aaKnown RBP16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 MED13Q9UHV7 2174 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 IGHV5-51A0A0C4DH38 117 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 OR51F1A6NGY5 319 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 PSMD3O43242 534 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 ITGB2P05107 769 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 RPS6KA1Q15418 735 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 DBN1Q16643 649 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 MEI1Q5TIA1 1274 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 KLHL35Q6PF15 583 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 PIANPQ8IYJ0 282 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 EXD3Q8N9H8 876 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 STYXQ8WUJ0 223 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 HEXDCQ8WVB3 486 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 CDKN2AIPNLQ96HQ2 116 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 ULBP3Q9BZM4 244 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 RAB33BQ9H082 229 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 COG4Q9H9E3 785 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 GPN2Q9H9Y4 310 aaPredicted RBP16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 ETNK1Q9HBU6 452 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 SLC24A2Q9UI40 661 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 ZNF148Q9UQR1 794 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 ANKRD12Q6UB98 2062 aa16.79■□□□□ 0.28
CDC42BPB-208ENST00000561271 LOC101059948A0A1B0GTJ6 334 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 KLHL33A6NCF5 533 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 OR5K3A6NET4 321 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 CCDC175P0C221 793 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 FAM87AP0C7U9 286 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 MSNP26038 577 aaKnown RBP16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 ARCN1P48444 511 aaKnown RBP16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 LMAN1P49257 510 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 CACNG1Q06432 222 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 GSE1Q14687 1217 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 KCNAB1Q14722 419 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 DNTTIP2Q5QJE6 756 aaKnown RBP16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 PPP1R21Q6ZMI0 780 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 LINC00523Q86TU6 105 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 OOSP2Q86WS3 158 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 CLDN19Q8N6F1 224 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 DNAAF3Q8N9W5 541 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 GLIS1Q8NBF1 620 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 KLHL6Q8WZ60 621 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 KIAA1143Q96AT1 154 aaPredicted RBP16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 ALS2CR12Q96Q35 445 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 MAP3K3Q99759 626 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 ARHGAP9Q9BRR9 750 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 FRMD8P1Q9BZ68 369 aaPredicted RBP16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 KIR3DX1Q9H7L2 352 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 NUP210LQ5VU65 1888 aa16.78■□□□□ 0.28
CDC42BPB-208ENST00000561271 BSNQ9UPA5 3926 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 TENM4Q6N022 2769 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 TLCD2A6NGC4 264 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 MROH6A6NGR9 719 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 ERI2A8K979 691 aaKnown RBP16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 E7EVH7 732 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 NELFEP18615 380 aaKnown RBP16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 MAP4P27816 1152 aaKnown RBP16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 STIP1P31948 543 aaKnown RBP16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 FOXN2P32314 431 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 FDFT1P37268 417 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 GRIA1P42261 906 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 PREPP48147 710 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 CDH17Q12864 832 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 SIX1Q15475 284 aaPredicted RBP16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 TBR1Q16650 682 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 ZNF658BQ4V348 819 aaPredicted RBP16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 CAPRIN2Q6IMN6 1127 aaKnown RBP16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 CERS6Q6ZMG9 384 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 RASGRP3Q8IV61 690 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 CCDC89Q8N998 374 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 GALNT6Q8NCL4 622 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 UBXN4Q92575 508 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 CCM2Q9BSQ5 444 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 OR52A5Q9H2C5 316 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 VPS37BQ9H9H4 285 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 RAB6BQ9NRW1 208 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 HRASLS2Q9NWW9 162 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 IL17BQ9UHF5 180 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 LNPEPQ9UIQ6 1025 aa16.77■□□□□ 0.28
CDC42BPB-208ENST00000561271 HEATR5BQ9P2D3 2071 aa16.76■□□□□ 0.27
CDC42BPB-208ENST00000561271 CCDC162PA2VCL2 907 aa16.76■□□□□ 0.27
CDC42BPB-208ENST00000561271 OR6C74A6NCV1 312 aa16.76■□□□□ 0.27
CDC42BPB-208ENST00000561271 ZNF891A8MT65 544 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms