RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 LRRN3Q9H3W5 708 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 COG4Q9H9E3 785 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 WDR70Q9NW82 654 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 TLK1Q9UKI8 766 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 CLCA2Q9UQC9 943 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 PLEKHM1Q9Y4G2 1056 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 TEX264Q9Y6I9 313 aa10.5□□□□□ -0.73
TPM1-229ENST00000561242 A0A087WUV0 522 aaPredicted RBP10.49□□□□□ -0.73
TPM1-229ENST00000561242 MATN2O00339 956 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 FANCGO15287 622 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 ERLIN1O75477 346 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 TCEA3O75764 348 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 RASSF9O75901 435 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 MT-CO3P00414 261 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 CATP04040 527 aaKnown RBP10.49□□□□□ -0.73
TPM1-229ENST00000561242 CELA2BP08218 269 aaPredicted RBP10.49□□□□□ -0.73
TPM1-229ENST00000561242 PRSS56P0CW18 603 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 CBSLP0DN79 551 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 ENO3P13929 434 aaPredicted RBP10.49□□□□□ -0.73
TPM1-229ENST00000561242 CSTF2P33240 577 aaKnown RBP eCLIP10.49□□□□□ -0.73
TPM1-229ENST00000561242 CBSP35520 551 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 CCNFP41002 786 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 SLC1A2P43004 574 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 MSH2P43246 934 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 MAGEA3P43357 314 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 EPHA4P54764 986 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 ADARP55265 1226 aaKnown RBP10.49□□□□□ -0.73
TPM1-229ENST00000561242 IL2P60568 153 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 FOXK2Q01167 660 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 IFFO1Q0D2I5 559 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 PHF19Q5T6S3 580 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 GRTP1Q5TC63 336 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 TMEM164Q5U3C3 297 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 GUSBP11Q6P575 273 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 DHRS13Q6UX07 377 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 TRMT10CQ7L0Y3 403 aaKnown RBP10.49□□□□□ -0.73
TPM1-229ENST00000561242 GPR156Q8NFN8 814 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 SLC37A2Q8TED4 501 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 MRRFQ96E11 262 aaKnown RBP10.49□□□□□ -0.73
TPM1-229ENST00000561242 CPNE1Q99829 537 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 RAB11FIP5Q9BXF6 653 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 SRMSQ9H3Y6 488 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 UTP6Q9NYH9 597 aaKnown RBP10.49□□□□□ -0.73
TPM1-229ENST00000561242 NFU1Q9UMS0 254 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 AK5Q9Y6K8 562 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 RNF215Q9Y6U7 377 aa10.49□□□□□ -0.73
TPM1-229ENST00000561242 CHD5Q8TDI0 1954 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 IGLV3-16A0A075B6K0 115 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 ZCWPW2A0A1B0GU75 182 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 E7ESA3 106 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 GAPDHSO14556 408 aaPredicted RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 OPA1O60313 960 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 CBFA2T3O75081 653 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 BANF1O75531 89 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 KRT38O76015 456 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 UBXN7O94888 489 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 CPNE6O95741 557 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 SYF2O95926 243 aaKnown RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 FUCA1P04066 466 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 S100BP04271 92 aaPredicted RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 MTHFD1P11586 935 aaKnown RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 CYP2A7P20853 494 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 RBMS1P29558 406 aaKnown RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 SSTR1P30872 391 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 HSD17B2P37059 387 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 GP5P40197 560 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 LEPRP48357 1165 aaKnown RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 ARCN1P48444 511 aaKnown RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 ACADVLP49748 655 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 PMS2P54278 862 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 TSTA3Q13630 321 aaPredicted RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 FRG1Q14331 258 aaKnown RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 USP10Q14694 798 aaKnown RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 RPE65Q16518 533 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 TYSND1Q2T9J0 566 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 MSS51Q4VC12 460 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 KHDC1Q4VXA5 237 aaKnown RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 SNAP47Q5SQN1 464 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 TMTC4Q5T4D3 741 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 TEDDM1Q5T9Z0 273 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 KLC3Q6P597 504 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 FOXR1Q6PIV2 292 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 TMEM26Q6ZUK4 368 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 FRA10AC1Q70Z53 315 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 NRROSQ86YC3 692 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 DENND6AQ8IWF6 608 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 TBC1D21Q8IYX1 336 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 KRT222Q8N1A0 295 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 SFRP1Q8N474 314 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 NKAPQ8N5F7 415 aaKnown RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 PNPLA1Q8N8W4 532 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 EIF1ADQ8N9N8 165 aaKnown RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 C2CD4AQ8NCU7 369 aaPredicted RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 ACVR1CQ8NER5 493 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 MCOLN3Q8TDD5 553 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 FBF1Q8TES7 1133 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 UBLCP1Q8WVY7 318 aaPredicted RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 KCNJ9Q92806 393 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 RAD51AP1Q96B01 352 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 SLC22A18Q96BI1 424 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms