RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 HALP42357 657 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 CARSP49589 748 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 GPX6P59796 221 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 MGAT5Q09328 741 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 GBX1Q14549 363 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 CLCA4Q14CN2 919 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 TCEA2Q15560 299 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 RPE65Q16518 533 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 CLPPQ16740 277 aaPredicted RBP9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 PLA2G4EQ3MJ16 856 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 CTSL3PQ5NE16 218 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 HP1BP3Q5SSJ5 553 aaPredicted RBP9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 PERM1Q5SV97 790 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 N4BP2L1Q5TBK1 243 aaPredicted RBP9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 TRMT10BQ6PF06 316 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 C3orf62Q6ZUJ4 267 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 EFL1Q7Z2Z2 1120 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 RAB44Q7Z6P3 723 aaPredicted RBP9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 SLC9B2Q86UD5 537 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 SLC26A11Q86WA9 606 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 PALM2Q8IXS6 379 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 LRRN4CLQ8ND94 238 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 IFI44Q8TCB0 444 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 NAT14Q8WUY8 206 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 ASZ1Q8WWH4 475 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 PATE1Q8WXA2 126 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 CFAP36Q96G28 342 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 MCMBPQ9BTE3 642 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 FUT8Q9BYC5 575 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 OR52A5Q9H2C5 316 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 OSGEPL1Q9H4B0 414 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 LRRC4CQ9HCJ2 640 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 SLC40A1Q9NP59 571 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 IARS2Q9NSE4 1012 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 POT1Q9NUX5 634 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 SCHIP1Q9P0W5 487 aaPredicted RBP9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 LRIT1Q9P2V4 623 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 CPNE7Q9UBL6 633 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 MTRF1LQ9UGC7 380 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 CORO1CQ9ULV4 474 aaPredicted RBP9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 WASF3Q9UPY6 502 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 CDYLQ9Y232 598 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 WDR37Q9Y2I8 494 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 RNF215Q9Y6U7 377 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 TCRBV9S1A1TA0A576 114 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 UBA6A0AVT1 1052 aaPredicted RBP9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 CPED1A4D0V7 1026 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 LILRA5A6NI73 299 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 FAM159BA6NKW6 160 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 PDZK1P1A8MUH7 402 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 NTN3O00634 580 aaPredicted RBP9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 ZW10O43264 779 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 B4GAT1O43505 415 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 OPA1O60313 960 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 SNX2O60749 519 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 TCEA3O75764 348 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 HAUS5O94927 633 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 RPL10P27635 214 aaKnown RBP9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 ACADLP28330 430 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 TNFRSF8P28908 595 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 FMO4P31512 558 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 EPHA4P54764 986 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 MAZP56270 477 aaKnown RBP9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 HHEXQ03014 270 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 SMAD1Q15797 465 aaKnown RBP9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 ZNF789Q5FWF6 425 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 PLEKHS1Q5SXH7 462 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 CDCP2Q5VXM1 449 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 PTRHD1Q6GMV3 140 aaKnown RBP9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 ZNF549Q6P9A3 640 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 SPRED1Q7Z699 444 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 SLC22A15Q8IZD6 547 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 LILRA3Q8N6C8 439 aaPredicted RBP9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 OTUD6BQ8N6M0 293 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 ELMO1Q92556 727 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 KCNJ9Q92806 393 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 CCDC74AQ96AQ1 378 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 C9orf72Q96LT7 481 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 INSM2Q96T92 566 aaPredicted RBP9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 FMO2Q99518 471 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 CCDC3Q9BQI4 270 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 WWP1Q9H0M0 922 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 EPB41L1Q9H4G0 881 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 STN1Q9H668 368 aaKnown RBP9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 FBXO6Q9NRD1 293 aaPredicted RBP9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 NSMCE4AQ9NXX6 385 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 RABGEF1Q9UJ41 708 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 CRYL1Q9Y2S2 319 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 MED16Q9Y2X0 877 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 HEBP2Q9Y5Z4 205 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 ADAMTS20P59510 1910 aa9.42□□□□□ -0.9
RABGGTA-221ENST00000561055 RHPN2P1A8MT19 583 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 IQCF5A8MTL0 148 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 SLU7O95391 586 aaKnown RBP9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 VIPP01282 170 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 APOA4P06727 396 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 ADRB1P08588 477 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 RHOXF2BP0C7M4 288 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms