RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 SYCE1LA8MT33 242 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 ZNF99A8MXY4 864 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 TMEM233B4DJY2 109 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 CRYZL1O95825 349 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 ZDHHC11BP0C7U3 371 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 IMPDH1P20839 514 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 SHMT2P34897 504 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 TAS2R39P59534 338 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 IL10RBQ08334 325 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 SMARCB1Q12824 385 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 CRY1Q16526 586 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 PARP15Q460N3 678 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 PAGE2BQ5JRK9 111 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 RTP2Q5QGT7 225 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 LYSMD2Q8IV50 215 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 PGBD5Q8N414 524 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 Q8N9G6 341 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 CAPNS2Q96L46 248 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 CFHR5Q9BXR6 569 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 EMILIN2Q9BXX0 1053 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 TRIM54Q9BYV2 358 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 ADNPQ9H2P0 1102 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 HMX1Q9NP08 348 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 XPR1Q9UBH6 696 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 PCDHGA3Q9Y5H0 932 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 A0A087X1B8 175 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 H0Y858 1186 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 H7C4K7 107 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 RAMP2O60895 175 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 PAPSS2O95340 614 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 THRBP10828 461 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 PRKCAP17252 672 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 HDCP19113 662 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 ATP5F1P24539 256 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 ARSFP54793 590 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 TUBA1BP68363 451 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 POU4F1Q01851 419 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 C19orf57Q0VDD7 668 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 DUSP4Q13115 394 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 SERINC3Q13530 473 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 DAG1Q14118 895 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 TCTN1Q2MV58 587 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 WDR45BQ5MNZ6 344 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 NADSYN1Q6IA69 706 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 TUBA1AQ71U36 451 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 REM2Q8IYK8 340 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 ARRDC2Q8TBH0 407 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 DYNC2LI1Q8TCX1 351 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 SLC22A17Q8WUG5 538 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 NXNL1Q96CM4 212 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 MYEOVQ96EZ4 313 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 RPRD1AQ96P16 312 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 CYP2S1Q96SQ9 504 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 CCSER2Q9H7U1 834 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 TLR9Q9NR96 1032 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 LRFN2Q9ULH4 789 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 TET1Q8NFU7 2136 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 BPTFQ12830 3046 aa13.77□□□□□ -0.21
RABGGTA-220ENST00000560998 LOC105371267A0A1B0GV96 52 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 MROH6A6NGR9 719 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 SLC38A8A6NNN8 435 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 UBXN8O00124 270 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 B4GAT1O43505 415 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 SEC24AO95486 1093 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 ABCB1P08183 1280 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 ACVRL1P37023 503 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 MAPKAPK2P49137 400 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 CLCQ05315 142 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 ELAVL2Q12926 359 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 MAPK11Q15759 364 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 C6orf141Q5SZD1 244 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 RSBN1Q5VWQ0 802 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 CNSTQ6PJW8 725 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 TAS1R1Q7RTX1 841 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 SNX29P2Q8IUI4 249 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 FAM126BQ8IXS8 530 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 GRPEL2Q8TAA5 225 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 GIPC2Q8TF65 315 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 C2orf15Q8WU43 125 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 MOCOSQ96EN8 888 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 OMDQ99983 421 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 MRPL57Q9BQC6 102 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 DGCR6LQ9BY27 220 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 DSN1Q9H410 356 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 ACSS2Q9NR19 701 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 ZNF221Q9UK13 617 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 NT5C1B-RDH14C9J2C7 533 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 RAD51BO15315 384 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 TLR5O60602 858 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 GALTP07902 379 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 HTR1AP08908 422 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 TACR2P21452 398 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 PCMT1P22061 227 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 GPX3P22352 226 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 OR1E1P30953 314 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 PBX3P40426 434 aa13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 NKX2-5P52952 324 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-220ENST00000560998 GP2P55259 537 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms