RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ZFYVE27Q5T4F4 411 aa18.04■□□□□ 0.48
TPM1-226ENST00000560959 FAM69BQ5VUD6 431 aa18.04■□□□□ 0.48
TPM1-226ENST00000560959 TMEM220Q6QAJ8 160 aa18.04■□□□□ 0.48
TPM1-226ENST00000560959 Q6ZS92 163 aa18.04■□□□□ 0.48
TPM1-226ENST00000560959 CLEC1AQ8NC01 280 aa18.04■□□□□ 0.48
TPM1-226ENST00000560959 DDHD1Q8NEL9 900 aa18.04■□□□□ 0.48
TPM1-226ENST00000560959 UBE2Q2Q8WVN8 375 aa18.04■□□□□ 0.48
TPM1-226ENST00000560959 INSM2Q96T92 566 aaPredicted RBP18.04■□□□□ 0.48
TPM1-226ENST00000560959 ILKAPQ9H0C8 392 aaPredicted RBP18.04■□□□□ 0.48
TPM1-226ENST00000560959 ZNF552Q9H707 407 aaPredicted RBP18.04■□□□□ 0.48
TPM1-226ENST00000560959 BZW2Q9Y6E2 419 aaKnown RBP18.04■□□□□ 0.48
TPM1-226ENST00000560959 COLEC10Q9Y6Z7 277 aa18.04■□□□□ 0.48
TPM1-226ENST00000560959 C9J4A7 227 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 AURKAO14965 403 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 KLF7O75840 302 aaPredicted RBP18.03■□□□□ 0.48
TPM1-226ENST00000560959 SKILP12757 684 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 CYP2A7P20853 494 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 AGXTP21549 392 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 CTSCP53634 463 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 PRKAA1Q13131 559 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 SASS6Q6UVJ0 657 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 GALNT16Q8N428 558 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 ZADH2Q8N4Q0 377 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 OR1L3Q8NH93 324 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 MARVELD3Q96A59 401 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 RNF157Q96PX1 679 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 TLR10Q9BXR5 811 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 BPIFA1Q9NP55 256 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 CHMP5Q9NZZ3 219 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 POMT2Q9UKY4 750 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 SRPK3Q9UPE1 567 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 PCDHGA10Q9Y5H3 936 aa18.03■□□□□ 0.48
TPM1-226ENST00000560959 MGAT4DA6NG13 374 aa18.02■□□□□ 0.48
TPM1-226ENST00000560959 SLC9B1P1A6NJY1 282 aa18.02■□□□□ 0.48
TPM1-226ENST00000560959 MAP3K7O43318 606 aa18.02■□□□□ 0.48
TPM1-226ENST00000560959 NDUFS1P28331 727 aa18.02■□□□□ 0.48
TPM1-226ENST00000560959 PREPP48147 710 aa18.02■□□□□ 0.48
TPM1-226ENST00000560959 RAPSNQ13702 412 aa18.02■□□□□ 0.48
TPM1-226ENST00000560959 ITGA9Q13797 1035 aa18.02■□□□□ 0.48
TPM1-226ENST00000560959 NAA30Q147X3 362 aaPredicted RBP18.02■□□□□ 0.48
TPM1-226ENST00000560959 DCAF10Q5QP82 559 aa18.02■□□□□ 0.48
TPM1-226ENST00000560959 ZNF385CQ66K41 422 aaPredicted RBP18.02■□□□□ 0.48
TPM1-226ENST00000560959 MRGPREQ86SM8 312 aa18.02■□□□□ 0.48
TPM1-226ENST00000560959 C12orf66Q96MD2 445 aa18.02■□□□□ 0.48
TPM1-226ENST00000560959 RUBCNLQ9H714 662 aa18.02■□□□□ 0.48
TPM1-226ENST00000560959 SPO11Q9Y5K1 396 aa18.02■□□□□ 0.48
TPM1-226ENST00000560959 CFAP20Q9Y6A4 193 aaKnown RBP18.02■□□□□ 0.48
TPM1-226ENST00000560959 SEC16AO15027 2179 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 HEATR9A2RTY3 570 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 ZNF487B1APH4 448 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 TMEM150CB9EJG8 249 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 LCA5LO95447 670 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 EPOP01588 193 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 CDH3P22223 829 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 SPAM1P38567 509 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 GLRBP48167 497 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 ZRSR2Q15696 482 aaKnown RBP18.01■□□□□ 0.47
TPM1-226ENST00000560959 PCSK7Q16549 785 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 STX1AQ16623 288 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 KYNUQ16719 465 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 LONRF2Q1L5Z9 754 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 SP5Q6BEB4 398 aaPredicted RBP18.01■□□□□ 0.47
TPM1-226ENST00000560959 VSIG1Q86XK7 387 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 TTC30BQ8N4P2 665 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 OR2L2Q8NH16 312 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 COG1Q8WTW3 980 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 INPP5DQ92835 1189 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 PPM1MQ96MI6 270 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 AGAP3Q96P47 875 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 SLC7A5P2Q9GIP4 190 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 WWP1Q9H0M0 922 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 SMOXQ9NWM0 555 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 IL17CQ9P0M4 197 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 LCMT1Q9UIC8 334 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 HEBP2Q9Y5Z4 205 aa18.01■□□□□ 0.47
TPM1-226ENST00000560959 APCP25054 2843 aa18■□□□□ 0.47
TPM1-226ENST00000560959 LOC285095A0A1B0GVY8 99 aa18■□□□□ 0.47
TPM1-226ENST00000560959 OR2AG2A6NM03 316 aa18■□□□□ 0.47
TPM1-226ENST00000560959 E7EQ34 232 aa18■□□□□ 0.47
TPM1-226ENST00000560959 PEX12O00623 359 aa18■□□□□ 0.47
TPM1-226ENST00000560959 UGT1A9O60656 530 aa18■□□□□ 0.47
TPM1-226ENST00000560959 MT-CYBP00156 380 aaPredicted RBP18■□□□□ 0.47
TPM1-226ENST00000560959 PRF1P14222 555 aa18■□□□□ 0.47
TPM1-226ENST00000560959 UGT1A6P19224 532 aa18■□□□□ 0.47
TPM1-226ENST00000560959 POLR2CP19387 275 aaPredicted RBP18■□□□□ 0.47
TPM1-226ENST00000560959 HLA-DPA1P20036 260 aa18■□□□□ 0.47
TPM1-226ENST00000560959 UGT1A1P22309 533 aa18■□□□□ 0.47
TPM1-226ENST00000560959 UGT1A4P22310 534 aa18■□□□□ 0.47
TPM1-226ENST00000560959 ITGA3P26006 1051 aa18■□□□□ 0.47
TPM1-226ENST00000560959 OTX2P32243 289 aa18■□□□□ 0.47
TPM1-226ENST00000560959 CA5AP35218 305 aa18■□□□□ 0.47
TPM1-226ENST00000560959 AP1B1Q10567 949 aa18■□□□□ 0.47
TPM1-226ENST00000560959 PDK1Q15118 436 aa18■□□□□ 0.47
TPM1-226ENST00000560959 PTCHD3Q3KNS1 767 aa18■□□□□ 0.47
TPM1-226ENST00000560959 FILIP1LQ4L180 1135 aa18■□□□□ 0.47
TPM1-226ENST00000560959 TEX44Q53QW1 395 aa18■□□□□ 0.47
TPM1-226ENST00000560959 FIGNQ5HY92 759 aa18■□□□□ 0.47
TPM1-226ENST00000560959 GPRC6AQ5T6X5 926 aa18■□□□□ 0.47
TPM1-226ENST00000560959 HGSNATQ68CP4 663 aa18■□□□□ 0.47
TPM1-226ENST00000560959 FBXO38Q6PIJ6 1188 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms