RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 DNAJC16Q9Y2G8 782 aa6.29□□□□□ -1.4
USP8-213ENST00000560885 HIVEP1P15822 2718 aa6.29□□□□□ -1.4
USP8-213ENST00000560885 PIKFYVEQ9Y2I7 2098 aa6.29□□□□□ -1.4
USP8-213ENST00000560885 PCM1Q15154 2024 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 UBA6A0AVT1 1052 aaPredicted RBP6.28□□□□□ -1.4
USP8-213ENST00000560885 ANKUB1A6NFN9 424 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 TLCD2A6NGC4 264 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 LGALS16A8MUM7 142 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 ZNF185O15231 689 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 KRT86O43790 486 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 KLHL41O60662 606 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 CDK14O94921 469 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 ZBTB11O95625 1053 aaPredicted RBP6.28□□□□□ -1.4
USP8-213ENST00000560885 FTLP02792 175 aaPredicted RBP6.28□□□□□ -1.4
USP8-213ENST00000560885 EBLN1P0CF75 366 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 MYBL1P10243 752 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 TCF4P15884 667 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 POU3F2P20265 443 aaPredicted RBP6.28□□□□□ -1.4
USP8-213ENST00000560885 ALAS2P22557 587 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 IL4RP24394 825 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 VAV2P52735 878 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 DRG2P55039 364 aaKnown RBP6.28□□□□□ -1.4
USP8-213ENST00000560885 ITGA1P56199 1179 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 PPP1CAP62136 330 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 TNP2Q05952 138 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 GALNT2Q10471 571 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 GPS2Q13227 327 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 ELOAQ14241 798 aaKnown RBP6.28□□□□□ -1.4
USP8-213ENST00000560885 PIGHQ14442 188 aaPredicted RBP6.28□□□□□ -1.4
USP8-213ENST00000560885 PAFAH1B3Q15102 231 aaKnown RBP6.28□□□□□ -1.4
USP8-213ENST00000560885 IFI16Q16666 785 aaKnown RBP6.28□□□□□ -1.4
USP8-213ENST00000560885 PLEKHN1Q494U1 663 aaPredicted RBP6.28□□□□□ -1.4
USP8-213ENST00000560885 CCDC122Q5T0U0 273 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 TMTC4Q5T4D3 741 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 ZNF648Q5T619 568 aaPredicted RBP6.28□□□□□ -1.4
USP8-213ENST00000560885 CRTC3Q6UUV7 619 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 IGFL3Q6UXB1 125 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 C11orf96Q7Z7L8 435 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 TMEM126BQ8IUX1 230 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 ZNF547Q8IVP9 402 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 SRRM1Q8IYB3 904 aaKnown RBP6.28□□□□□ -1.4
USP8-213ENST00000560885 DSELQ8IZU8 1212 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 D2HGDHQ8N465 521 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 TRAM1L1Q8N609 369 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 ENDOVQ8N8Q3 282 aaKnown RBP6.28□□□□□ -1.4
USP8-213ENST00000560885 SLC38A9Q8NBW4 561 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 GPR26Q8NDV2 337 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 FAM71BQ8TC56 605 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 CPT1BQ92523 772 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 ZNF501Q96CX3 271 aaPredicted RBP6.28□□□□□ -1.4
USP8-213ENST00000560885 EID2BQ96D98 161 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 MOCOSQ96EN8 888 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 C19orf60Q96EN9 201 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 VPS35Q96QK1 796 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 BARD1Q99728 777 aaKnown RBP6.28□□□□□ -1.4
USP8-213ENST00000560885 MAP3K3Q99759 626 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 NUP85Q9BW27 656 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 XPO4Q9C0E2 1151 aaKnown RBP6.28□□□□□ -1.4
USP8-213ENST00000560885 MAGEE1Q9HCI5 957 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 LATS2Q9NRM7 1088 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 ASF1BQ9NVP2 202 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 FANCLQ9NW38 375 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 DTLQ9NZJ0 730 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 LUZP4Q9P127 313 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 LIMA1Q9UHB6 759 aaKnown RBP6.28□□□□□ -1.4
USP8-213ENST00000560885 B3GNT3Q9Y2A9 372 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 TTLL3Q9Y4R7 772 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 MAP1AP78559 2803 aaPredicted RBP6.28□□□□□ -1.4
USP8-213ENST00000560885 CROCCQ5TZA2 2017 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 CCDC88CQ9P219 2028 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 PCSK5Q92824 1860 aa6.28□□□□□ -1.4
USP8-213ENST00000560885 AKAP9Q99996 3911 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 ITPR3Q14573 2671 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 OR5K3A6NET4 321 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 A6NL46 340 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 HNRNPRO43390 633 aaKnown RBP6.27□□□□□ -1.41
USP8-213ENST00000560885 MFSD11O43934 449 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 ALPPP05187 535 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 HLA-DQB2P05538 268 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 MMP2P08253 660 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 MSL3P1P0C860 447 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 CD86P42081 329 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 PER3P56645 1201 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 SLC25A11Q02978 314 aaKnown RBP6.27□□□□□ -1.41
USP8-213ENST00000560885 DMPKQ09013 629 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 NIPAL4Q0D2K0 466 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 TMEM115Q12893 351 aaPredicted RBP6.27□□□□□ -1.41
USP8-213ENST00000560885 NAA30Q147X3 362 aaPredicted RBP6.27□□□□□ -1.41
USP8-213ENST00000560885 PLCL1Q15111 1095 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 GPR19Q15760 415 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 DNTTIP2Q5QJE6 756 aaKnown RBP6.27□□□□□ -1.41
USP8-213ENST00000560885 PLEKHS1Q5SXH7 462 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 CCDC183Q5T5S1 534 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 SAMD5Q5TGI4 173 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 VWA5B1Q5TIE3 1220 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 LYPLAL1Q5VWZ2 237 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 ALS2CLQ60I27 953 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 TXNRD3NBQ6F5E7 133 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 TMC3Q7Z5M5 1100 aa6.27□□□□□ -1.41
USP8-213ENST00000560885 CISD2Q8N5K1 135 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms