RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 OR10G6Q8NH81 332 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 CXorf40BQ96DE9 158 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 SLC46A1Q96NT5 459 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 KRT12Q99456 494 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 DPYSL5Q9BPU6 564 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 P2RY12Q9H244 342 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 EPB41L1Q9H4G0 881 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 EPB41L5Q9HCM4 733 aa14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 CFAP20Q9Y6A4 193 aaKnown RBP14.93□□□□□ -0.02
SNRPA1-213ENST00000560856 PKD1L2Q7Z442 2459 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 SLC5A10A0PJK1 596 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 CDRT15L2A8MXV6 281 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 GOLGA8KD6RF30 607 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 GOLGA8TH3BQL2 631 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 QSOX1O00391 747 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 PLD2O14939 933 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 DUX1O43812 170 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 MPSTP25325 297 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 TTPAP49638 278 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 RPA4Q13156 261 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 EIF3IQ13347 325 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 TRA2AQ13595 282 aaKnown RBP eCLIP14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 DHX34Q14147 1143 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 TYSND1Q2T9J0 566 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 AARS2Q5JTZ9 985 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 HIBCHQ6NVY1 386 aaPredicted RBP14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 DUS1LQ6P1R4 473 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 RAB11FIP2Q7L804 512 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 LKAAEAR1Q8TD35 194 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 NCSTNQ92542 709 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 CCDC74BQ96LY2 380 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 C12orf66Q96MD2 445 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 TTC1Q99614 292 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 CARD6Q9BX69 1037 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 STRADBQ9C0K7 418 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 VPS37BQ9H9H4 285 aa14.92□□□□□ -0.02
SNRPA1-213ENST00000560856 SRRM3A6NNA2 597 aaPredicted RBP14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 PRMT5O14744 637 aaPredicted RBP14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 LIN7AO14910 233 aaPredicted RBP14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 BANF1O75531 89 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 UBXN7O94888 489 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 C9P02748 559 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 SLC35G4P0C7Q5 338 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 OR56A5P0C7T3 313 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 HGFP14210 728 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 TYRP1P17643 537 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 RPS3P23396 243 aaKnown RBP eCLIP14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 ACADLP28330 430 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 ETV5P41161 510 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 PREPP48147 710 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 CD151P48509 253 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 MRPS25P82663 173 aaKnown RBP14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 MORF4L2Q15014 288 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 TBC1D25Q3MII6 688 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 PHF19Q5T6S3 580 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 NEPROQ6NW34 567 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 CASC4Q6P4E1 433 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 NAPRTQ6XQN6 538 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 ZNF572Q7Z3I7 529 aaPredicted RBP14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 ARHGAP22Q7Z5H3 698 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 PCGF5Q86SE9 256 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 IGDCC3Q8IVU1 814 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 LSMEM2Q8N112 164 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 FBXO39Q8N4B4 442 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 RCBTB1Q8NDN9 531 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 SNIP1Q8TAD8 396 aaKnown RBP14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 ZFPM2Q8WW38 1151 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 RSC1A1Q92681 617 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 ZNF669Q96BR6 464 aaPredicted RBP14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 AHCYL2Q96HN2 611 aaKnown RBP14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 PWWP2AQ96N64 755 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 PLAC1Q9HBJ0 212 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 IMP3Q9NV31 184 aaKnown RBP14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 IL1RAPL1Q9NZN1 696 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 ANAPC5Q9UJX4 755 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 CDYLQ9Y232 598 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 RAXQ9Y2V3 346 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 LOXL2Q9Y4K0 774 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 RPS6KL1Q9Y6S9 549 aa14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 MN1Q10571 1320 aaPredicted RBP14.91□□□□□ -0.02
SNRPA1-213ENST00000560856 IQCF5A8MTL0 148 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 BHMG1C9JSJ3 638 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 HGSO14964 777 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 GPC4O75487 556 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 USP1O94782 785 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 SEC31AO94979 1220 aaKnown RBP14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 FTH1P02794 183 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 OGNP20774 298 aaKnown RBP14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 CCR7P32248 378 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 PPARGP37231 505 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 MLLT3P42568 568 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 MAPK9P45984 424 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 GFERP55789 205 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 ERVPABLB-1P60509 514 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 DHX9Q08211 1270 aaKnown RBP14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 CENPUQ71F23 418 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 CLEC14AQ86T13 490 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 CILP2Q8IUL8 1156 aa14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 JPH3Q8WXH2 748 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-213ENST00000560856 ELMO1Q92556 727 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms