RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 FAM71DQ8N9W8 422 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 SPC24Q8NBT2 197 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 STYXQ8WUJ0 223 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 RSC1A1Q92681 617 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 PMEPA1Q969W9 287 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 APOL2Q9BQE5 337 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 LACRTQ9GZZ8 138 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 KIR3DX1Q9H7L2 352 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 ZDHHC3Q9NYG2 299 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 LNPEPQ9UIQ6 1025 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 PSMD13Q9UNM6 376 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 REXO2Q9Y3B8 237 aaKnown RBP13.77□□□□□ -0.21
TPM1-223ENST00000560445 KCTD3Q9Y597 815 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 RPS6KL1Q9Y6S9 549 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 OR5K3A6NET4 321 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 GOLGA6L3A6NEY3 463 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 C21orf140B9A014 251 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 E7EVH7 732 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 H7C0S8 307 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 GAPDHSO14556 408 aaPredicted RBP13.76□□□□□ -0.21
TPM1-223ENST00000560445 SLC28A2O43868 658 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 RECKO95980 971 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 ATP1B2P14415 290 aaPredicted RBP13.76□□□□□ -0.21
TPM1-223ENST00000560445 TCN2P20062 427 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 MC4RP32245 332 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 LEPRP48357 1165 aaKnown RBP13.76□□□□□ -0.21
TPM1-223ENST00000560445 LMAN1P49257 510 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 ARSDP51689 593 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 HSD11B2P80365 405 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 PLOD1Q02809 727 aaPredicted RBP13.76□□□□□ -0.21
TPM1-223ENST00000560445 CACNG1Q06432 222 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 CDC20Q12834 499 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 NFATC3Q12968 1075 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 TUBB3Q13509 450 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 LINC00303Q3SY05 128 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 ZRANB3Q5FWF4 1079 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 LYPLAL1Q5VWZ2 237 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 ATG14Q6ZNE5 492 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 FAM92BQ6ZTR7 304 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 PRICKLE2Q7Z3G6 844 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 ACVR1CQ8NER5 493 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 STARD8Q92502 1023 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 SLC41A2Q96JW4 573 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 TSSK1BQ9BXA7 367 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 SPRY4Q9C004 299 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 WWP1Q9H0M0 922 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 SLC25A18Q9H1K4 315 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 SYTL2Q9HCH5 934 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 STARD5Q9NSY2 213 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 NLE1Q9NVX2 485 aaPredicted RBP13.76□□□□□ -0.21
TPM1-223ENST00000560445 HRASLS2Q9NWW9 162 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 SEMA5BQ9P283 1151 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 PADI1Q9ULC6 663 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 WDR37Q9Y2I8 494 aa13.76□□□□□ -0.21
TPM1-223ENST00000560445 TLN1Q9Y490 2541 aaKnown RBP13.75□□□□□ -0.21
TPM1-223ENST00000560445 AP3B1O00203 1094 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 ZBTB11O95625 1053 aaPredicted RBP13.75□□□□□ -0.21
TPM1-223ENST00000560445 AP2A1O95782 977 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 FTH1P02794 183 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 FAM87AP0C7U9 286 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 ACRV1P26436 265 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 FDFT1P37268 417 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 CD151P48509 253 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 POLE2P56282 527 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 XIAPP98170 497 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 SRSF6Q13247 344 aaKnown RBP13.75□□□□□ -0.21
TPM1-223ENST00000560445 KCNAB2Q13303 367 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 KLF1Q13351 362 aaPredicted RBP13.75□□□□□ -0.21
TPM1-223ENST00000560445 C4orf22Q6V702 233 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 NLRP9Q7RTR0 991 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 CFAP206Q8IYR0 622 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 DNAAF3Q8N9W5 541 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 OR13C4Q8NGS5 318 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 SLC35B2Q8TB61 432 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 APOBEC4Q8WW27 367 aaKnown RBP13.75□□□□□ -0.21
TPM1-223ENST00000560445 HES6Q96HZ4 224 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 GORASP1Q9BQQ3 440 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 MVB12BQ9H7P6 319 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 C10orf88Q9H8K7 445 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 APMAPQ9HDC9 416 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 SOHLH2Q9NX45 425 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 SLC24A2Q9UI40 661 aa13.75□□□□□ -0.21
TPM1-223ENST00000560445 HEATR9A2RTY3 570 aa13.74□□□□□ -0.21
TPM1-223ENST00000560445 GPR39O43194 453 aa13.74□□□□□ -0.21
TPM1-223ENST00000560445 LDB2O43679 373 aa13.74□□□□□ -0.21
TPM1-223ENST00000560445 KIAA0754O94854 1291 aa13.74□□□□□ -0.21
TPM1-223ENST00000560445 FTCDO95954 541 aa13.74□□□□□ -0.21
TPM1-223ENST00000560445 DLSTP36957 453 aa13.74□□□□□ -0.21
TPM1-223ENST00000560445 NSG1P42857 185 aa13.74□□□□□ -0.21
TPM1-223ENST00000560445 TUBB4BP68371 445 aa13.74□□□□□ -0.21
TPM1-223ENST00000560445 CDH17Q12864 832 aa13.74□□□□□ -0.21
TPM1-223ENST00000560445 TUBB2AQ13885 445 aa13.74□□□□□ -0.21
TPM1-223ENST00000560445 ITIH4Q14624 930 aa13.74□□□□□ -0.21
TPM1-223ENST00000560445 FAM182AQ5T1J6 154 aa13.74□□□□□ -0.21
TPM1-223ENST00000560445 KCTD11Q693B1 232 aa13.74□□□□□ -0.21
TPM1-223ENST00000560445 DENND5AQ6IQ26 1287 aa13.74□□□□□ -0.21
TPM1-223ENST00000560445 PPP1R21Q6ZMI0 780 aa13.74□□□□□ -0.21
TPM1-223ENST00000560445 FAM83HQ6ZRV2 1179 aaPredicted RBP13.74□□□□□ -0.21
TPM1-223ENST00000560445 TAS2R42Q7RTR8 314 aa13.74□□□□□ -0.21
TPM1-223ENST00000560445 HOOK3Q86VS8 718 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms