RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 PLA2G4EQ3MJ16 856 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 DRICH1Q6PGQ1 229 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-214ENST00000560402 NPNTQ6UXI9 565 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 TIPARPQ7Z3E1 657 aaKnown RBP13.32□□□□□ -0.28
SMAD3-214ENST00000560402 CROCCP2Q86T23 111 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 BRSK1Q8TDC3 778 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 APOBEC4Q8WW27 367 aaKnown RBP13.32□□□□□ -0.28
SMAD3-214ENST00000560402 TRIM51Q9BSJ1 452 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 HEMGNQ9BXL5 484 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 ULBP3Q9BZM4 244 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 TRIM31Q9BZY9 425 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 RAB33BQ9H082 229 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 SCHIP1Q9P0W5 487 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-214ENST00000560402 WHRNQ9P202 907 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 EPHA6Q9UF33 1036 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 FAM153AQ9UHL3 310 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 KCTD3Q9Y597 815 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 RPS6KL1Q9Y6S9 549 aa13.32□□□□□ -0.28
SMAD3-214ENST00000560402 hCG_1818297A0A087WSY0 165 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 GOLGA8KD6RF30 607 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 MT-CYBP00156 380 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-214ENST00000560402 EPOP01588 193 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 PRKAR1AP10644 381 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 TCN2P20062 427 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 PTPN3P26045 913 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 CDKN2BP42772 138 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 DYNLT1P63172 113 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 TLE1Q04724 770 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 GABPB1Q06547 395 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-214ENST00000560402 FOXM1Q08050 763 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 DMPKQ09013 629 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 SLMAPQ14BN4 828 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 SIX1Q15475 284 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-214ENST00000560402 ZNF648Q5T619 568 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-214ENST00000560402 KAZNQ674X7 775 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 KLHL35Q6PF15 583 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 MFSD7Q6UXD7 560 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 LRIG3Q6UXM1 1119 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 TRAPPC5Q8IUR0 188 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 ZNF547Q8IVP9 402 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 SPATA22Q8NHS9 363 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 TFB1MQ8WVM0 346 aaKnown RBP13.31□□□□□ -0.28
SMAD3-214ENST00000560402 C1orf54Q8WWF1 131 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 COL26A1Q96A83 441 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 CXorf40BQ96DE9 158 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 ZDHHC12Q96GR4 267 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 SNF8Q96H20 258 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 TEKT5Q96M29 485 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 TTC25Q96NG3 672 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 TGM7Q96PF1 710 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 ZNF624Q9P2J8 865 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-214ENST00000560402 SLC23A2Q9UGH3 650 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 DNAJC16Q9Y2G8 782 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 PCDHB3Q9Y5E6 796 aa13.31□□□□□ -0.28
SMAD3-214ENST00000560402 MAST4O15021 2626 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 HECTD1Q9ULT8 2610 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 TCRBV7S2A1N4TA0A589 114 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 NKX2-8O15522 239 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 MTX2O75431 263 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 PMPCBO75439 489 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 ZNF189O75820 626 aaPredicted RBP13.3□□□□□ -0.28
SMAD3-214ENST00000560402 RASSF9O75901 435 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 MT-ND3P03897 115 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 BRAFP15056 766 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 TYRP1P17643 537 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 HLA-DPA1P20036 260 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 SPAM1P38567 509 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 SNX1Q13596 522 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 ITGA9Q13797 1035 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 GPR18Q14330 331 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 SEPT7Q16181 437 aaKnown RBP13.3□□□□□ -0.28
SMAD3-214ENST00000560402 ATP13A5Q4VNC0 1218 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 LDLRAP1Q5SW96 308 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 TTC27Q6P3X3 843 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 C6orf15Q6UXA7 325 aaPredicted RBP13.3□□□□□ -0.28
SMAD3-214ENST00000560402 BBS12Q6ZW61 710 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 C11orf96Q7Z7L8 435 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 DDHD1Q8NEL9 900 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 GDAP1Q8TB36 358 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 RSC1A1Q92681 617 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 STAMBPL1Q96FJ0 436 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 OR6C1Q96RD1 312 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 VAT1Q99536 393 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 SLC40A1Q9NP59 571 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 SMOXQ9NWM0 555 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 KCND3Q9UK17 655 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 ZNF148Q9UQR1 794 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 DRG1Q9Y295 367 aaKnown RBP13.3□□□□□ -0.28
SMAD3-214ENST00000560402 SNX24Q9Y343 169 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 SLC30A1Q9Y6M5 507 aa13.3□□□□□ -0.28
SMAD3-214ENST00000560402 LOC285095A0A1B0GVY8 99 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 KLHL33A6NCF5 533 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 LIASO43766 372 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 RECKO95980 971 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 FGF5P12034 268 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 NFKB1P19838 968 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 RPL10P27635 214 aaKnown RBP13.29□□□□□ -0.28
SMAD3-214ENST00000560402 CASRP41180 1078 aa13.29□□□□□ -0.28
SMAD3-214ENST00000560402 LEPRP48357 1165 aaKnown RBP13.29□□□□□ -0.28
SMAD3-214ENST00000560402 PLTPP55058 493 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms