RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	UTS2R	Q9UKP6	389 aa		5.68	□□□□□ -1.5
LRRC49-223	ENST00000560369	TMPRSS11E	Q9UL52	423 aa		5.68	□□□□□ -1.5
LRRC49-223	ENST00000560369	RIMKLB	Q9ULI2	386 aa		5.68	□□□□□ -1.5
LRRC49-223	ENST00000560369	RAB26	Q9ULW5	256 aa		5.68	□□□□□ -1.5
LRRC49-223	ENST00000560369	ARIH1	Q9Y4X5	557 aa	Predicted RBP	5.68	□□□□□ -1.5
LRRC49-223	ENST00000560369	NEUROG3	Q9Y4Z2	214 aa		5.68	□□□□□ -1.5
LRRC49-223	ENST00000560369	PCDHA9	Q9Y5H5	950 aa		5.68	□□□□□ -1.5
LRRC49-223	ENST00000560369	ST14	Q9Y5Y6	855 aa		5.68	□□□□□ -1.5
LRRC49-223	ENST00000560369	NIN	Q8N4C6	2090 aa		5.68	□□□□□ -1.5
LRRC49-223	ENST00000560369	PCM1	Q15154	2024 aa		5.68	□□□□□ -1.5
LRRC49-223	ENST00000560369	CCL16	O15467	120 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	TRBC1	P01850	177 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	G6PD	P11413	515 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	IMPDH2	P12268	514 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	LHCGR	P22888	699 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	HMGCL	P35914	325 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	TTPA	P49638	278 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	ACADVL	P49748	655 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	OR4D2	P58180	307 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	STX1B	P61266	288 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	DCTN2	Q13561	401 aa	Known RBP	5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	RAB33A	Q14088	237 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	PTGR1	Q14914	329 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	POM121L1P	Q3SYA9	428 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	IL27RA	Q6UWB1	636 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	GPRIN3	Q6ZVF9	776 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	OTOP2	Q7RTS6	562 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	ZBTB46	Q86UZ6	589 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	DHFR2	Q86XF0	187 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	TMEM25	Q86YD3	366 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	TMC8	Q8IU68	726 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	VRK3	Q8IV63	474 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	C10orf111	Q8N326	155 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	TRIML2	Q8N7C3	387 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	LMNTD1	Q8N9Z9	388 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	CHST14	Q8NCH0	376 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	TSPAN14	Q8NG11	270 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	CLHC1	Q8NHS4	586 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	GABPB2	Q8TAK5	448 aa	Predicted RBP	5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	EME1	Q96AY2	570 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	TRMT2B	Q96GJ1	504 aa	Known RBP	5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	PPM1M	Q96MI6	270 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	CCT7	Q99832	543 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	TMEM79	Q9BSE2	394 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	SLC46A2	Q9BY10	475 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	LINC00597	Q9H2U6	94 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	IKZF5	Q9H5V7	419 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	CARS2	Q9HA77	564 aa	Known RBP	5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	SLC6A13	Q9NSD5	602 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	ABCB8	Q9NUT2	735 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	FAM8A1	Q9UBU6	413 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	ZNHIT2	Q9UHR6	403 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	STOML2	Q9UJZ1	356 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	NDUFAF1	Q9Y375	327 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	DHRS7	Q9Y394	339 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	POLR3H	Q9Y535	204 aa	Predicted RBP	5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	MAGED1	Q9Y5V3	778 aa	Predicted RBP	5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	KIAA1549L	Q6ZVL6	1849 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	CEP290	O15078	2479 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	KIF26A	Q9ULI4	1882 aa	Predicted RBP	5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369		A0A1W2PQ67	120 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	ANGPT2	O15123	496 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	ARPC2	O15144	300 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	HOXA2	O43364	376 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	SYNCRIP	O60506	623 aa	Known RBP	5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	SNX2	O60749	519 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	RFPL2	O75678	378 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	OLFM2	O95897	454 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	FUT4	P22083	530 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	HRH2	P25021	359 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	HLA-F	P30511	346 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	GSK3B	P49841	420 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	ENTPD1	P49961	510 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	MTPN	P58546	118 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	ATP6V0D1	P61421	351 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	NTHL1	P78549	312 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	PLOD1	Q02809	727 aa	Predicted RBP	5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	PRKCQ	Q04759	706 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	CACNG1	Q06432	222 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	TRAF3	Q13114	568 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	NFATC2	Q13469	925 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	NFYC	Q13952	458 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	RPS6KA2	Q15349	733 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	ANKDD1A	Q495B1	522 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	PTRHD1	Q6GMV3	140 aa	Known RBP	5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	TBPL2	Q6SJ96	375 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	CRTC1	Q6UUV9	634 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	SERPINA13P	Q6UXR4	307 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	RBM12B	Q8IXT5	1001 aa	Known RBP	5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	CMTR2	Q8IYT2	770 aa	Known RBP	5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	AFAP1L2	Q8N4X5	818 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	NKAP	Q8N5F7	415 aa	Known RBP	5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	KRTCAP2	Q8N6L1	136 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	PAF1	Q8N7H5	531 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	FAM86B1	Q8N7N1	296 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	ZNF366	Q8N895	744 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	FNDC5	Q8NAU1	212 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	METTL6	Q8TCB7	284 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	OVCA2	Q8WZ82	227 aa		5.67	□□□□□ -1.5
LRRC49-223	ENST00000560369	ZNF558	Q96NG5	402 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms