RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 GOT2P00505 430 aaKnown RBP12.91□□□□□ -0.34
SMAD3-213ENST00000560175 KRT14P02533 472 aa12.91□□□□□ -0.34
SMAD3-213ENST00000560175 MPSTP25325 297 aa12.91□□□□□ -0.34
SMAD3-213ENST00000560175 CSTF2P33240 577 aaKnown RBP eCLIP12.91□□□□□ -0.34
SMAD3-213ENST00000560175 CAPZBP47756 277 aa12.91□□□□□ -0.34
SMAD3-213ENST00000560175 PAPD7Q5XG87 772 aaKnown RBP12.91□□□□□ -0.34
SMAD3-213ENST00000560175 FOXR1Q6PIV2 292 aa12.91□□□□□ -0.34
SMAD3-213ENST00000560175 AFTPHQ6ULP2 937 aa12.91□□□□□ -0.34
SMAD3-213ENST00000560175 TAS2R42Q7RTR8 314 aa12.91□□□□□ -0.34
SMAD3-213ENST00000560175 PDZD3Q86UT5 571 aa12.91□□□□□ -0.34
SMAD3-213ENST00000560175 MCUQ8NE86 351 aa12.91□□□□□ -0.34
SMAD3-213ENST00000560175 SPDYE1Q8NFV5 336 aaPredicted RBP12.91□□□□□ -0.34
SMAD3-213ENST00000560175 KLHL6Q8WZ60 621 aa12.91□□□□□ -0.34
SMAD3-213ENST00000560175 RMDN2Q96LZ7 410 aa12.91□□□□□ -0.34
SMAD3-213ENST00000560175 AP1M1Q9BXS5 423 aa12.91□□□□□ -0.34
SMAD3-213ENST00000560175 TWSG1Q9GZX9 223 aa12.91□□□□□ -0.34
SMAD3-213ENST00000560175 COG4Q9H9E3 785 aa12.91□□□□□ -0.34
SMAD3-213ENST00000560175 OCIAD1Q9NX40 245 aa12.91□□□□□ -0.34
SMAD3-213ENST00000560175 FOXJ2Q9P0K8 574 aa12.91□□□□□ -0.34
SMAD3-213ENST00000560175 PRSS21Q9Y6M0 314 aa12.91□□□□□ -0.34
SMAD3-213ENST00000560175 EFSO43281 561 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 MLNP12872 115 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 TYRP1P17643 537 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 AMD1P17707 334 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 ARNTP27540 789 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 NDUFS1P28331 727 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 FNTAP49354 379 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 UCNP55089 124 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 GFERP55789 205 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 RAB15P59190 212 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 BASP1P80723 227 aaKnown RBP12.9□□□□□ -0.34
SMAD3-213ENST00000560175 SEMA3AQ14563 771 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 TMEM164Q5U3C3 297 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 CCDC137Q6PK04 289 aaKnown RBP12.9□□□□□ -0.34
SMAD3-213ENST00000560175 PRSS42Q7Z5A4 293 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 CAND1Q86VP6 1230 aaKnown RBP12.9□□□□□ -0.34
SMAD3-213ENST00000560175 PPHLN1Q8NEY8 458 aaKnown RBP12.9□□□□□ -0.34
SMAD3-213ENST00000560175 CPT1BQ92523 772 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 RSC1A1Q92681 617 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 ANP32BQ92688 251 aaKnown RBP12.9□□□□□ -0.34
SMAD3-213ENST00000560175 SLCO2A1Q92959 643 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 CRELD1Q96HD1 420 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 ASPSCR1Q9BZE9 553 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 KIR3DX1Q9H7L2 352 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 VPS37BQ9H9H4 285 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 KCND1Q9NSA2 647 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 SIDT1Q9NXL6 827 aaKnown RBP12.9□□□□□ -0.34
SMAD3-213ENST00000560175 SMARCAL1Q9NZC9 954 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 BFARQ9NZS9 450 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 SLC24A2Q9UI40 661 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 SOX13Q9UN79 622 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 HEBP2Q9Y5Z4 205 aa12.9□□□□□ -0.34
SMAD3-213ENST00000560175 SLC5A10A0PJK1 596 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 CCDC78A2IDD5 438 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 LIN7AO14910 233 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-213ENST00000560175 ZNF185O15231 689 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 CAPN5O15484 640 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-213ENST00000560175 KLK10O43240 276 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 PHF2O75151 1096 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 POLBP06746 335 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 LIPCP11150 499 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 TCP1P17987 556 aaKnown RBP12.89□□□□□ -0.35
SMAD3-213ENST00000560175 ACADLP28330 430 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 NMBRP28336 390 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 PDHA2P29803 388 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 PBLDP30039 288 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-213ENST00000560175 MAGEA3P43357 314 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 MAPK10P53779 464 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 SESN2P58004 480 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-213ENST00000560175 CRADDP78560 199 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 GPS1Q13098 491 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 ART4Q93070 314 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 PMEPA1Q969W9 287 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.89□□□□□ -0.352e-6■■■■■ 35.5
SMAD3-213ENST00000560175 ZDHHC12Q96GR4 267 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 NAF1Q96HR8 494 aaKnown RBP12.89□□□□□ -0.35
SMAD3-213ENST00000560175 C12orf66Q96MD2 445 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 TEFMQ96QE5 360 aaKnown RBP12.89□□□□□ -0.35
SMAD3-213ENST00000560175 TTC1Q99614 292 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 ZPBPQ9BS86 351 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 CARD6Q9BX69 1037 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 ZNF768Q9H5H4 540 aaKnown RBP12.89□□□□□ -0.35
SMAD3-213ENST00000560175 PCYOX1Q9UHG3 505 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 B3GALT1Q9Y5Z6 326 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 CFAP20Q9Y6A4 193 aaKnown RBP12.89□□□□□ -0.35
SMAD3-213ENST00000560175 COLEC10Q9Y6Z7 277 aa12.89□□□□□ -0.35
SMAD3-213ENST00000560175 ATMQ13315 3056 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 MAGEB16A2A368 324 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 OR5K3A6NET4 321 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 EFCAB7A8K855 629 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 A8MU76 341 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 K7ENP7 123 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 OR1I1O60431 355 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 GPC4O75487 556 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 FTH1P02794 183 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 SLC35G4P0C7Q5 338 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 OR56A5P0C7T3 313 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 MGAT1P26572 445 aa12.88□□□□□ -0.35
SMAD3-213ENST00000560175 PPARGP37231 505 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-213ENST00000560175 LEPRP48357 1165 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms