RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 POT1Q9NUX5 634 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 INTS10Q9NVR2 710 aaKnown RBP16.48■□□□□ 0.23
RPL28-209ENST00000560055 FAM8A1Q9UBU6 413 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 ZC3H7BQ9UGR2 993 aaKnown RBP16.48■□□□□ 0.23
RPL28-209ENST00000560055 NEUROG3Q9Y4Z2 214 aa16.48■□□□□ 0.23
RPL28-209ENST00000560055 ESYT3A0FGR9 886 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 F8W8V4 182 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 EIF3HO15372 352 aaKnown RBP eCLIP16.47■□□□□ 0.23
RPL28-209ENST00000560055 S1PR4O95977 384 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 MT-CO3P00414 261 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 RPLP0P05388 317 aaKnown RBP16.47■□□□□ 0.23
RPL28-209ENST00000560055 HALP42357 657 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 SLC1A2P43004 574 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 PDX1P52945 283 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 PLTPP55058 493 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 OR1D5P58170 312 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 RPA4Q13156 261 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 THOC5Q13769 683 aaKnown RBP16.47■□□□□ 0.23
RPL28-209ENST00000560055 RPE65Q16518 533 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 HSP90AA5PQ58FG0 334 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 CTSL3PQ5NE16 218 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 HP1BP3Q5SSJ5 553 aaPredicted RBP16.47■□□□□ 0.23
RPL28-209ENST00000560055 UNQ6494/PRO21346Q6UXR6 183 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 CCNI2Q6ZMN8 369 aaPredicted RBP16.47■□□□□ 0.23
RPL28-209ENST00000560055 KCNMB4Q86W47 210 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 CNTN4Q8IWV2 1026 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 CEP112Q8N8E3 955 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 Q8N9G6 341 aaPredicted RBP16.47■□□□□ 0.23
RPL28-209ENST00000560055 SPDYE1Q8NFV5 336 aaPredicted RBP16.47■□□□□ 0.23
RPL28-209ENST00000560055 LKAAEAR1Q8TD35 194 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 SH3KBP1Q96B97 665 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 RMDN2Q96LZ7 410 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 WWP1Q9H0M0 922 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 STN1Q9H668 368 aaKnown RBP16.47■□□□□ 0.23
RPL28-209ENST00000560055 EPB41L5Q9HCM4 733 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 SLC40A1Q9NP59 571 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 GNPTGQ9UJJ9 305 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 PSMD13Q9UNM6 376 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 CLCA2Q9UQC9 943 aa16.47■□□□□ 0.23
RPL28-209ENST00000560055 IGHV1OR21-1A0A087WYE8 117 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 PRAMEF33A0A0G2JMD5 474 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 SLC5A10A0PJK1 596 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 FAM149AA5PLN7 773 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 LILRA5A6NI73 299 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 IQCF5A8MTL0 148 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 D6RAR5 112 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 LIN7AO14910 233 aaPredicted RBP16.46■□□□□ 0.23
RPL28-209ENST00000560055 PFDN6O15212 129 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 ZNF500O60304 480 aaPredicted RBP16.46■□□□□ 0.23
RPL28-209ENST00000560055 VIPP01282 170 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 PROS1P07225 676 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 SLC35G4P0C7Q5 338 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 MTHFD1P11586 935 aaKnown RBP16.46■□□□□ 0.23
RPL28-209ENST00000560055 CD1CP29017 333 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 PDHA2P29803 388 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 ALDH4A1P30038 563 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 CCR7P32248 378 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 EPHA4P54764 986 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 CTBP1Q13363 440 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 BIRC2Q13490 618 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 SQSTM1Q13501 440 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 SPIDRQ14159 915 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 GLE1Q53GS7 698 aaKnown RBP16.46■□□□□ 0.23
RPL28-209ENST00000560055 ZNF789Q5FWF6 425 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 RBM44Q6ZP01 1051 aaKnown RBP16.46■□□□□ 0.23
RPL28-209ENST00000560055 ZNF761Q86XN6 746 aaPredicted RBP16.46■□□□□ 0.23
RPL28-209ENST00000560055 MARCH9Q86YJ5 346 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 ANKMY2Q8IV38 441 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 RBM12BQ8IXT5 1001 aaKnown RBP16.46■□□□□ 0.23
RPL28-209ENST00000560055 FBXO36Q8NEA4 188 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 CALML6Q8TD86 181 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 ELMO1Q92556 727 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 CERS2Q96G23 380 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 CFAP36Q96G28 342 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 INSM2Q96T92 566 aaPredicted RBP16.46■□□□□ 0.23
RPL28-209ENST00000560055 SLC38A3Q99624 504 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 FAM167BQ9BTA0 163 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 L2HGDHQ9H9P8 463 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 ZDHHC18Q9NUE0 388 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 DMGDHQ9UI17 866 aaKnown RBP16.46■□□□□ 0.23
RPL28-209ENST00000560055 VPS9D1Q9Y2B5 631 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 MSRB2Q9Y3D2 182 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 PCDHB1Q9Y5F3 818 aa16.46■□□□□ 0.23
RPL28-209ENST00000560055 UBA6A0AVT1 1052 aaPredicted RBP16.45■□□□□ 0.22
RPL28-209ENST00000560055 ESR1P03372 595 aa16.45■□□□□ 0.22
RPL28-209ENST00000560055 F7P08709 466 aaPredicted RBP16.45■□□□□ 0.22
RPL28-209ENST00000560055 ERVK-10P10266 1014 aa16.45■□□□□ 0.22
RPL28-209ENST00000560055 JUPP14923 745 aa16.45■□□□□ 0.22
RPL28-209ENST00000560055 PREPP48147 710 aa16.45■□□□□ 0.22
RPL28-209ENST00000560055 CD151P48509 253 aa16.45■□□□□ 0.22
RPL28-209ENST00000560055 EIF3BP55884 814 aaKnown RBP16.45■□□□□ 0.22
RPL28-209ENST00000560055 GPLD1P80108 840 aa16.45■□□□□ 0.22
RPL28-209ENST00000560055 PLOD1Q02809 727 aaPredicted RBP16.45■□□□□ 0.22
RPL28-209ENST00000560055 GUCY2DQ02846 1103 aa16.45■□□□□ 0.22
RPL28-209ENST00000560055 TARDBPQ13148 414 aaKnown RBP eCLIP16.45■□□□□ 0.22
RPL28-209ENST00000560055 CAMK2BQ13554 666 aa16.45■□□□□ 0.22
RPL28-209ENST00000560055 CLPPQ16740 277 aaPredicted RBP16.45■□□□□ 0.22
RPL28-209ENST00000560055 PTRHD1Q6GMV3 140 aaKnown RBP16.45■□□□□ 0.22
RPL28-209ENST00000560055 TRMT10BQ6PF06 316 aaKnown RBP16.45■□□□□ 0.22
RPL28-209ENST00000560055 NAPRTQ6XQN6 538 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms