RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 FAM219BQ5XKK7 198 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 KIAA0895LQ68EN5 471 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 PNCKQ6P2M8 343 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 CRTC3Q6UUV7 619 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 USP30Q70CQ3 517 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 NLRP9Q7RTR0 991 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 SNX20Q7Z614 316 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 KBTBD6Q86V97 674 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 ZC3HC1Q86WB0 502 aaKnown RBP5.15□□□□□ -1.59
SPG11-220ENST00000559933 CEP97Q8IW35 865 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 CNTN4Q8IWV2 1026 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 NDUFAF2Q8N183 169 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 C4orf33Q8N1A6 199 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 NXPE1Q8N323 547 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 DCLK2Q8N568 766 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 TRAM1L1Q8N609 369 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 LILRA3Q8N6C8 439 aaPredicted RBP5.15□□□□□ -1.59
SPG11-220ENST00000559933 CLDN19Q8N6F1 224 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 GPATCH11Q8N954 259 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 FAM181AQ8N9Y4 354 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 DTWD2Q8NBA8 298 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 SIDT2Q8NBJ9 832 aaKnown RBP5.15□□□□□ -1.59
SPG11-220ENST00000559933 KCT2Q8NC54 265 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 OR2T34Q8NGX1 318 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 GDAP1Q8TB36 358 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 MZB1Q8WU39 189 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 ISL2Q96A47 359 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 RAB7BQ96AH8 199 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 BIRC7Q96CA5 298 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 HSPA12BQ96MM6 686 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 PLEKHG4BQ96PX9 1271 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 CYTH2Q99418 400 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 NELL2Q99435 816 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 RBBP8Q99708 897 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 OLFM1Q99784 485 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 ORAI3Q9BRQ5 295 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 NAT9Q9BTE0 207 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 MCMBPQ9BTE3 642 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 KRTAP9-2Q9BYQ4 174 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 SLC17A9Q9BYT1 436 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 MIR1-1HGQ9H1L0 117 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 TRABDQ9H4I3 376 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 C12orf49Q9H741 205 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 PREBQ9HCU5 417 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 MRPL40Q9NQ50 206 aaKnown RBP5.15□□□□□ -1.59
SPG11-220ENST00000559933 TM7SF3Q9NS93 570 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 EURLQ9NYK6 297 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 VPS18Q9P253 973 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 PSMC3IPQ9P2W1 217 aaPredicted RBP5.15□□□□□ -1.59
SPG11-220ENST00000559933 IKZF3Q9UKT9 509 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 SLC39A10Q9ULF5 831 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 MED16Q9Y2X0 877 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 PLEKHM1Q9Y4G2 1056 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 SLC30A1Q9Y6M5 507 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 ABCA7Q8IZY2 2146 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 PLXND1Q9Y4D7 1925 aa5.15□□□□□ -1.59
SPG11-220ENST00000559933 LAMA1P25391 3075 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 TRBV5-4A0A0C4DH59 114 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 MAGEB16A2A368 324 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 KRT87PA6NCN2 255 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 LRRC72A6NJI9 287 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 MEI4A8MW99 385 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 C10orf142B7Z368 130 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 PSMD11O00231 422 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 RASGRF2O14827 1237 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 SPAG7O75391 227 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 NDUFS3O75489 264 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 SPAG6O75602 509 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 SYF2O95926 243 aaKnown RBP5.14□□□□□ -1.59
SPG11-220ENST00000559933 FUCA1P04066 466 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 ALDOAP04075 364 aaKnown RBP5.14□□□□□ -1.59
SPG11-220ENST00000559933 WNT1P04628 370 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 INHBAP08476 426 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 ITGA2BP08514 1039 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 GSTA2P09210 222 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 TSHRP16473 764 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 ZNF8P17098 575 aaPredicted RBP5.14□□□□□ -1.59
SPG11-220ENST00000559933 JUNBP17275 347 aaPredicted RBP5.14□□□□□ -1.59
SPG11-220ENST00000559933 OGNP20774 298 aaKnown RBP5.14□□□□□ -1.59
SPG11-220ENST00000559933 PMLP29590 882 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 AVPR2P30518 371 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 GP5P40197 560 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 HADHAP40939 763 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 CD151P48509 253 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 TAS2R39P59534 338 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 RPS21P63220 83 aaKnown RBP5.14□□□□□ -1.59
SPG11-220ENST00000559933 CDK3Q00526 305 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 PDE1BQ01064 536 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 RPL6Q02878 288 aaKnown RBP5.14□□□□□ -1.59
SPG11-220ENST00000559933 DLG1Q12959 904 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 SGCGQ13326 291 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 FRG1Q14331 258 aaKnown RBP5.14□□□□□ -1.59
SPG11-220ENST00000559933 STAT4Q14765 748 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 E2F5Q15329 346 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 CCDC6Q16204 474 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 ZNF542PQ5EBM4 170 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 HECTD2Q5U5R9 776 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 KIAA1161Q6NSJ0 714 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 MRNIPQ6NTE8 343 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 TMEM207Q6UWW9 146 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms