RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 DLGAP2Q9P1A6 1054 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 UBA2Q9UBT2 640 aaPredicted RBP3.6□□□□□ -1.83
SPG11-218ENST00000559754 AMACRQ9UHK6 382 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 HAO1Q9UJM8 370 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 TUBE1Q9UJT0 475 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 RALYQ9UKM9 306 aaKnown RBP3.6□□□□□ -1.83
SPG11-218ENST00000559754 MKLN1Q9UL63 735 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 A4GNTQ9UNA3 340 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 UTYO14607 1347 aa3.6□□□□□ -1.83
SPG11-218ENST00000559754 A0A0U1RQK1 487 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 ZNF320A2RRD8 509 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 DDX39AO00148 427 aaKnown RBP3.59□□□□□ -1.83
SPG11-218ENST00000559754 DVL1O14640 695 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 CPLX1O14810 134 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 SEC14L5O43304 696 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 PSMD10O75832 226 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 RECQL5O94762 991 aaPredicted RBP3.59□□□□□ -1.83
SPG11-218ENST00000559754 SEC31AO94979 1220 aaKnown RBP3.59□□□□□ -1.83
SPG11-218ENST00000559754 FYNP06241 537 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 TUBBP07437 444 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 RNF224P0DH78 156 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 P4HA1P13674 534 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 FDPSP14324 419 aaKnown RBP3.59□□□□□ -1.83
SPG11-218ENST00000559754 TMEM11P17152 192 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 BDKRB2P30411 391 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 KIF5BP33176 963 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 HOXA1P49639 335 aaPredicted RBP3.59□□□□□ -1.83
SPG11-218ENST00000559754 VEGFCP49767 419 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 PNLIPRP2P54317 469 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 DVL1P1P54792 670 aaPredicted RBP3.59□□□□□ -1.83
SPG11-218ENST00000559754 CEBPZQ03701 1054 aaKnown RBP3.59□□□□□ -1.83
SPG11-218ENST00000559754 YWHAHQ04917 246 aaPredicted RBP3.59□□□□□ -1.83
SPG11-218ENST00000559754 OLIG2Q13516 323 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 CAMK2DQ13557 499 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 NAE1Q13564 534 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 CCNYL2Q5T2Q4 361 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 KRT79Q5XKE5 535 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 KIAA0930Q6ICG6 404 aaPredicted RBP3.59□□□□□ -1.83
SPG11-218ENST00000559754 CAVIN1Q6NZI2 390 aaKnown RBP3.59□□□□□ -1.83
SPG11-218ENST00000559754 SHQ1Q6PI26 577 aaKnown RBP3.59□□□□□ -1.83
SPG11-218ENST00000559754 TSSK4Q6SA08 328 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 KLHDC8BQ8IXV7 354 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 ZNF619Q8N2I2 560 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 TRIML1Q8N9V2 468 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 BBS10Q8TAM1 723 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 GTF3C6Q969F1 213 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 EXOC4Q96A65 974 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 MMABQ96EY8 250 aaPredicted RBP3.59□□□□□ -1.83
SPG11-218ENST00000559754 SLC41A2Q96JW4 573 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 TSPAN18Q96SJ8 248 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 MTERF1Q99551 399 aaKnown RBP3.59□□□□□ -1.83
SPG11-218ENST00000559754 NAA11Q9BSU3 229 aaPredicted RBP3.59□□□□□ -1.83
SPG11-218ENST00000559754 KIFC3Q9BVG8 833 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 HEMGNQ9BXL5 484 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 FUT8Q9BYC5 575 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 IFIH1Q9BYX4 1025 aaKnown RBP3.59□□□□□ -1.83
SPG11-218ENST00000559754 CSTL1Q9H114 145 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 PLEKHA4Q9H4M7 779 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 PPP1R3EQ9H7J1 279 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 MBNL1Q9NR56 388 aaKnown RBP3.59□□□□□ -1.83
SPG11-218ENST00000559754 ASAH2Q9NR71 780 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 FAM118AQ9NWS6 357 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 PSD3Q9NYI0 1048 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 OGFRQ9NZT2 677 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 MOSPD1Q9UJG1 213 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 LIPT1Q9Y234 373 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 WDR81Q562E7 1941 aa3.59□□□□□ -1.83
SPG11-218ENST00000559754 USP17L23D6RBM5 183 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 H0YAE9 185 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 ADAMDEC1O15204 470 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 IPO8O15397 1037 aaKnown RBP3.58□□□□□ -1.84
SPG11-218ENST00000559754 PAPSS1O43252 624 aaPredicted RBP3.58□□□□□ -1.84
SPG11-218ENST00000559754 HS6ST1O60243 411 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 WDR1O75083 606 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 NDUFS3O75489 264 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 B3GALNT1O75752 331 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 C22orf31O95567 290 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 TPOP07202 933 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 CFC1BP0CG36 223 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 CFC1P0CG37 223 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 DESP17661 470 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 TRIM21P19474 475 aaKnown RBP3.58□□□□□ -1.84
SPG11-218ENST00000559754 TIMP3P35625 211 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 PIP4K2AP48426 406 aaPredicted RBP3.58□□□□□ -1.84
SPG11-218ENST00000559754 GNAQP50148 359 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 EFNA5P52803 228 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 MRPS5P82675 430 aaKnown RBP3.58□□□□□ -1.84
SPG11-218ENST00000559754 SORDQ00796 357 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 C2orf68Q2NKX9 166 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 TYSND1Q2T9J0 566 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 ASTE1Q2TB18 679 aaPredicted RBP3.58□□□□□ -1.84
SPG11-218ENST00000559754 ZSCAN23Q3MJ62 389 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 MSANTD1Q6ZTZ1 278 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 ERN2Q76MJ5 926 aaKnown RBP3.58□□□□□ -1.84
SPG11-218ENST00000559754 ZNF34Q8IZ26 560 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 CIARTQ8N365 385 aaPredicted RBP3.58□□□□□ -1.84
SPG11-218ENST00000559754 CNBD1Q8NA66 436 aa3.58□□□□□ -1.84
SPG11-218ENST00000559754 ZNF622Q969S3 477 aaKnown RBP eCLIP3.58□□□□□ -1.84
SPG11-218ENST00000559754 LRRC59Q96AG4 307 aaKnown RBP3.58□□□□□ -1.84
SPG11-218ENST00000559754 CABS1Q96KC9 395 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms