RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 ZCCHC23Q6ZST2 131 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 ADGRG6Q86SQ4 1221 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 SYT12Q8IV01 421 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 LOXL4Q96JB6 756 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 SCYL1Q96KG9 808 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 PLCD4Q9BRC7 762 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 C20orf27Q9GZN8 174 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 KCNH6Q9H252 994 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 CCDC68Q9H2F9 335 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 TAS2R13Q9NYV9 303 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 CPSF2Q9P2I0 782 aaKnown RBP16.27■□□□□ 0.2
TPM1-219ENST00000559397 ATXN10Q9UBB4 475 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 XPR1Q9UBH6 696 aa16.27■□□□□ 0.2
TPM1-219ENST00000559397 TLR4O00206 839 aa16.27■□□□□ 0.19
TPM1-219ENST00000559397 VILLO15195 856 aa16.27■□□□□ 0.19
TPM1-219ENST00000559397 TRIM13O60858 407 aa16.27■□□□□ 0.19
TPM1-219ENST00000559397 ZNF37AP17032 561 aaPredicted RBP16.27■□□□□ 0.19
TPM1-219ENST00000559397 RPS3P23396 243 aaKnown RBP eCLIP16.27■□□□□ 0.19
TPM1-219ENST00000559397 PPARGP37231 505 aaPredicted RBP16.27■□□□□ 0.19
TPM1-219ENST00000559397 AFF3P51826 1226 aaKnown RBP16.27■□□□□ 0.19
TPM1-219ENST00000559397 SF3A3Q12874 501 aaKnown RBP eCLIP16.27■□□□□ 0.199e-9■■■■□ 23.4
TPM1-219ENST00000559397 ACAP2Q15057 778 aa16.27■□□□□ 0.19
TPM1-219ENST00000559397 SPNS2Q8IVW8 549 aa16.27■□□□□ 0.19
TPM1-219ENST00000559397 SPATA6LQ8N4H0 392 aa16.27■□□□□ 0.19
TPM1-219ENST00000559397 C10orf82Q8WW14 230 aa16.27■□□□□ 0.19
TPM1-219ENST00000559397 PIGKQ92643 395 aa16.27■□□□□ 0.19
TPM1-219ENST00000559397 TTC1Q99614 292 aa16.27■□□□□ 0.19
TPM1-219ENST00000559397 SLC17A4Q9Y2C5 497 aa16.27■□□□□ 0.19
TPM1-219ENST00000559397 TMEM98Q9Y2Y6 226 aa16.27■□□□□ 0.19
TPM1-219ENST00000559397 PCDHB1Q9Y5F3 818 aa16.27■□□□□ 0.19
TPM1-219ENST00000559397 PRR5-ARHGAP8B1AHC4 643 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 PRMT5O14744 637 aaPredicted RBP16.26■□□□□ 0.19
TPM1-219ENST00000559397 SGTAO43765 313 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 VEGFDO43915 354 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 H2AFYO75367 372 aaKnown RBP16.26■□□□□ 0.19
TPM1-219ENST00000559397 EPN2O95208 641 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 FUCA1P04066 466 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 CEACAM5P06731 702 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 RBP1P09455 135 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 TROVE2P10155 538 aaKnown RBP eCLIP16.26■□□□□ 0.19
TPM1-219ENST00000559397 GNSP15586 552 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 ZNF8P17098 575 aaPredicted RBP16.26■□□□□ 0.19
TPM1-219ENST00000559397 HOXD12P35452 270 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 NSG1P42857 185 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 CSNK1EP49674 416 aaKnown RBP16.26■□□□□ 0.19
TPM1-219ENST00000559397 IFT88Q13099 833 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 KLC3Q6P597 504 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 ENPP7Q6UWV6 458 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 MACC1Q6ZN28 852 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 DCP2Q8IU60 420 aaKnown RBP16.26■□□□□ 0.19
TPM1-219ENST00000559397 RBFAQ8N0V3 343 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 PPP1R14CQ8TAE6 165 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 KCNJ9Q92806 393 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 SCARF2Q96GP6 870 aaPredicted RBP16.26■□□□□ 0.19
TPM1-219ENST00000559397 WDR92Q96MX6 357 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 IRF2BPLQ9H1B7 796 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 OR2AG1Q9H205 316 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 ZNF395Q9H8N7 513 aaPredicted RBP16.26■□□□□ 0.19
TPM1-219ENST00000559397 SYTL2Q9HCH5 934 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 SUSD2Q9UGT4 822 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 PNMA8BQ9ULN7 279 aaPredicted RBP16.26■□□□□ 0.19
TPM1-219ENST00000559397 PCYT1BQ9Y5K3 369 aaPredicted RBP16.26■□□□□ 0.19
TPM1-219ENST00000559397 PRSS21Q9Y6M0 314 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 LAMA1P25391 3075 aa16.26■□□□□ 0.19
TPM1-219ENST00000559397 SPTY2D1-AS1A0A0U1RR47 76 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 ITM2AO43736 263 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 DLX3O60479 287 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 ATP1B2P14415 290 aaPredicted RBP16.25■□□□□ 0.19
TPM1-219ENST00000559397 CD1DP15813 335 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 ZNF7P17097 686 aaPredicted RBP16.25■□□□□ 0.19
TPM1-219ENST00000559397 MSH3P20585 1137 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 KELP23276 732 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 HTR1BP28222 390 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 AKT1P31749 480 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 DPP6P42658 865 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 SLC1A6P48664 564 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 THOP1P52888 689 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 NXPH1P58417 271 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 PDAP1Q13442 181 aaKnown RBP16.25■□□□□ 0.19
TPM1-219ENST00000559397 PTK2BQ14289 1009 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 LIPMQ5VYY2 423 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 DOK6Q6PKX4 331 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 YTHDF3Q7Z739 585 aaKnown RBP16.25■□□□□ 0.19
TPM1-219ENST00000559397 ISCA2Q86U28 154 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 RASGEF1AQ8N9B8 481 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 SUMF1Q8NBK3 374 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 OR56A4Q8NGH8 313 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 NAT14Q8WUY8 206 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 SREK1Q8WXA9 508 aaKnown RBP16.25■□□□□ 0.19
TPM1-219ENST00000559397 GATA5Q9BWX5 397 aaPredicted RBP16.25■□□□□ 0.19
TPM1-219ENST00000559397 TRIM55Q9BYV6 548 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 FGF22Q9HCT0 170 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 NPHS2Q9NP85 383 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 LRP4O75096 1905 aa16.25■□□□□ 0.19
TPM1-219ENST00000559397 TP53BP1Q12888 1972 aaPredicted RBP16.25■□□□□ 0.19
TPM1-219ENST00000559397 CCT8L1PA6NM43 557 aa16.24■□□□□ 0.19
TPM1-219ENST00000559397 TMEM114B3SHH9 223 aa16.24■□□□□ 0.19
TPM1-219ENST00000559397 NUAK1O60285 661 aa16.24■□□□□ 0.19
TPM1-219ENST00000559397 MAGEC1O60732 1142 aa16.24■□□□□ 0.19
TPM1-219ENST00000559397 CDK14O94921 469 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms