RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 MARCH9Q86YJ5 346 aa10.67□□□□□ -0.7
TPM1-217ENST00000559108 PALM2Q8IXS6 379 aa10.67□□□□□ -0.7
TPM1-217ENST00000559108 ARL10Q8N8L6 244 aa10.67□□□□□ -0.7
TPM1-217ENST00000559108 LMNTD1Q8N9Z9 388 aa10.67□□□□□ -0.7
TPM1-217ENST00000559108 SIDT2Q8NBJ9 832 aaKnown RBP10.67□□□□□ -0.7
TPM1-217ENST00000559108 HM13Q8TCT9 377 aa10.67□□□□□ -0.7
TPM1-217ENST00000559108 HEXDCQ8WVB3 486 aa10.67□□□□□ -0.7
TPM1-217ENST00000559108 CCDC74AQ96AQ1 378 aa10.67□□□□□ -0.7
TPM1-217ENST00000559108 ZNF514Q96K75 400 aaPredicted RBP10.67□□□□□ -0.7
TPM1-217ENST00000559108 TCF12Q99081 682 aa10.67□□□□□ -0.7
TPM1-217ENST00000559108 CCM2Q9BSQ5 444 aa10.67□□□□□ -0.7
TPM1-217ENST00000559108 AARSD1Q9BTE6 412 aaKnown RBP10.67□□□□□ -0.7
TPM1-217ENST00000559108 FAM129AQ9BZQ8 928 aa10.67□□□□□ -0.7
TPM1-217ENST00000559108 VPS37BQ9H9H4 285 aa10.67□□□□□ -0.7
TPM1-217ENST00000559108 PPANQ9NQ55 473 aaKnown RBP10.67□□□□□ -0.7
TPM1-217ENST00000559108 FTSJ1Q9UET6 329 aa10.67□□□□□ -0.7
TPM1-217ENST00000559108 MTRF1LQ9UGC7 380 aaKnown RBP10.67□□□□□ -0.7
TPM1-217ENST00000559108 TSR3Q9UJK0 312 aaKnown RBP10.67□□□□□ -0.7
TPM1-217ENST00000559108 IKZF3Q9UKT9 509 aa10.67□□□□□ -0.7
TPM1-217ENST00000559108 DNMT3AQ9Y6K1 912 aaPredicted RBP10.67□□□□□ -0.7
TPM1-217ENST00000559108 KIF26BQ2KJY2 2108 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 C17orf113A0A1B0GUU1 675 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 PDZK1P1A8MUH7 402 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 GPC4O75487 556 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 WISP3O95389 354 aaPredicted RBP10.66□□□□□ -0.7
TPM1-217ENST00000559108 LDOC1O95751 146 aaPredicted RBP10.66□□□□□ -0.7
TPM1-217ENST00000559108 TOP3BO95985 862 aaKnown RBP10.66□□□□□ -0.7
TPM1-217ENST00000559108 OR56A5P0C7T3 313 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 ACADLP28330 430 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 GCAP28676 217 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 NOVA1P51513 510 aaKnown RBP10.66□□□□□ -0.7
TPM1-217ENST00000559108 ZNF460Q14592 562 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 SUZ12Q15022 739 aaKnown RBP10.66□□□□□ -0.7
TPM1-217ENST00000559108 TRIP6Q15654 476 aaKnown RBP10.66□□□□□ -0.7
TPM1-217ENST00000559108 RPE65Q16518 533 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 ACSBG2Q5FVE4 666 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 RNF187Q5TA31 235 aaPredicted RBP10.66□□□□□ -0.7
TPM1-217ENST00000559108 TMEM207Q6UWW9 146 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 WASH2PQ6VEQ5 465 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 EFL1Q7Z2Z2 1120 aaKnown RBP10.66□□□□□ -0.7
TPM1-217ENST00000559108 TMPRSS9Q7Z410 1059 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 ZNF438Q7Z4V0 828 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 STRA8Q7Z7C7 330 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 GALNT7Q86SF2 657 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 SDCCAG8Q86SQ7 713 aaPredicted RBP10.66□□□□□ -0.7
TPM1-217ENST00000559108 GLRX5Q86SX6 157 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 LMNTD2Q8IXW0 634 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 SDR16C5Q8N3Y7 309 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 CD200R1Q8TD46 325 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 AENQ8WTP8 325 aaKnown RBP10.66□□□□□ -0.7
TPM1-217ENST00000559108 ELMO1Q92556 727 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 GPR21Q99679 349 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 PARD6BQ9BYG5 372 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 ACSS3Q9H6R3 686 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 CAB39LQ9H9S4 337 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 WASH6PQ9NQA3 447 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 GNPTGQ9UJJ9 305 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 PADI4Q9UM07 663 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 DOLKQ9UPQ8 538 aa10.66□□□□□ -0.7
TPM1-217ENST00000559108 MTO1Q9Y2Z2 717 aaKnown RBP10.66□□□□□ -0.7
TPM1-217ENST00000559108 ANKRD12Q6UB98 2062 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 SPTBN2O15020 2390 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 A0A1W2PQM1 296 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 CPED1A4D0V7 1026 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 EME2A4GXA9 379 aaPredicted RBP10.65□□□□□ -0.7
TPM1-217ENST00000559108 RIPK2O43353 540 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 B4GAT1O43505 415 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 TSPAN12O95859 305 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 FTH1P02794 183 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 ESR1P03372 595 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 GSTA2P09210 222 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 CKMT2P17540 419 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 IDSP22304 550 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 FDXRP22570 491 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 ACP1P24666 158 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 CSF2RBP32927 897 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 CD151P48509 253 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 CSRP3P50461 194 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 PDX1P52945 283 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 SIM1P81133 766 aaPredicted RBP10.65□□□□□ -0.7
TPM1-217ENST00000559108 CFHR1Q03591 330 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 HSPA14Q0VDF9 509 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 GRB7Q14451 532 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 NR0B2Q15466 257 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 CCSMST1Q4G0I0 132 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 CCDC157Q569K6 752 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 PTRHD1Q6GMV3 140 aaKnown RBP10.65□□□□□ -0.7
TPM1-217ENST00000559108 WDR93Q6P2C0 686 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 KIAA0408Q6ZU52 694 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 CYS1Q717R9 158 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 LRRC6Q86X45 466 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 RASGRP3Q8IV61 690 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 CEP97Q8IW35 865 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 CPNE9Q8IYJ1 553 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 SLC22A15Q8IZD6 547 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 PPM1NQ8N819 430 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 EIF1ADQ8N9N8 165 aaKnown RBP10.65□□□□□ -0.7
TPM1-217ENST00000559108 PHC3Q8NDX5 983 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 CALML6Q8TD86 181 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 MRRFQ96E11 262 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms