RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 ZNF449Q6P9G9 518 aa17.2■□□□□ 0.34
SMAD3-210ENST00000559092 PCSK4Q6UW60 755 aa17.2■□□□□ 0.34
SMAD3-210ENST00000559092 XKR5Q6UX68 686 aa17.2■□□□□ 0.34
SMAD3-210ENST00000559092 PPP1R21Q6ZMI0 780 aa17.2■□□□□ 0.34
SMAD3-210ENST00000559092 PIANPQ8IYJ0 282 aa17.2■□□□□ 0.34
SMAD3-210ENST00000559092 GPR150Q8NGU9 434 aa17.2■□□□□ 0.34
SMAD3-210ENST00000559092 PEX13Q92968 403 aa17.2■□□□□ 0.34
SMAD3-210ENST00000559092 C12orf66Q96MD2 445 aa17.2■□□□□ 0.34
SMAD3-210ENST00000559092 RANBP9Q96S59 729 aa17.2■□□□□ 0.34
SMAD3-210ENST00000559092 TRIT1Q9H3H1 467 aaKnown RBP17.2■□□□□ 0.34
SMAD3-210ENST00000559092 TMEM184BQ9Y519 407 aaPredicted RBP17.2■□□□□ 0.34
SMAD3-210ENST00000559092 SCN8AQ9UQD0 1980 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 QSOX1O00391 747 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 FGGP02679 453 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 ITGB2P05107 769 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 POLBP06746 335 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 NSG1P42857 185 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 CD151P48509 253 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 PLCL1Q15111 1095 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 ZNF658BQ4V348 819 aaPredicted RBP17.19■□□□□ 0.34
SMAD3-210ENST00000559092 CACHD1Q5VU97 1274 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 LYPLAL1Q5VWZ2 237 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 CYB5D1Q6P9G0 228 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 VASH2Q86V25 355 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 CACNA2D3Q8IZS8 1091 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 CARFQ8N187 725 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 IL22RA1Q8N6P7 574 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 SPDYE1Q8NFV5 336 aaPredicted RBP17.19■□□□□ 0.34
SMAD3-210ENST00000559092 UBXN4Q92575 508 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 SGSM3Q96HU1 749 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 CD180Q99467 661 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 KIR3DX1Q9H7L2 352 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 CASS4Q9NQ75 786 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 PIH1D1Q9NWS0 290 aaKnown RBP17.19■□□□□ 0.34
SMAD3-210ENST00000559092 PPP2R2CQ9Y2T4 447 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 PCDHGA4Q9Y5G9 962 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 ATMQ13315 3056 aa17.19■□□□□ 0.34
SMAD3-210ENST00000559092 OR5K3A6NET4 321 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 AP3B1O00203 1094 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 RAD1O60671 282 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 APRTP07741 180 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 NELFEP18615 380 aaKnown RBP17.18■□□□□ 0.34
SMAD3-210ENST00000559092 MSNP26038 577 aaKnown RBP17.18■□□□□ 0.34
SMAD3-210ENST00000559092 RPL22P35268 128 aaKnown RBP17.18■□□□□ 0.34
SMAD3-210ENST00000559092 MAP7Q14244 749 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 KRT33BQ14525 404 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 GSE1Q14687 1217 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 DBN1Q16643 649 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 KIAA1614Q5VZ46 1190 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 IRGCQ6NXR0 463 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 PACS1Q6VY07 963 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 CERS6Q6ZMG9 384 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 KMT5CQ86Y97 462 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 NLGN4XQ8N0W4 816 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 CLDN19Q8N6F1 224 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 NLGN4YQ8NFZ3 816 aaPredicted RBP17.18■□□□□ 0.34
SMAD3-210ENST00000559092 OR13J1Q8NGT2 312 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 NAT14Q8WUY8 206 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.18■□□□□ 0.342e-6■■■■■ 35.5
SMAD3-210ENST00000559092 TTC1Q99614 292 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 CTRCQ99895 268 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 EFHD1Q9BUP0 239 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 COG4Q9H9E3 785 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 APMAPQ9HDC9 416 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 EIF2B3Q9NR50 452 aaKnown RBP17.18■□□□□ 0.34
SMAD3-210ENST00000559092 HRASLS2Q9NWW9 162 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 SMARCAL1Q9NZC9 954 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 SLC24A2Q9UI40 661 aa17.18■□□□□ 0.34
SMAD3-210ENST00000559092 CFAP20Q9Y6A4 193 aaKnown RBP17.18■□□□□ 0.34
SMAD3-210ENST00000559092 ZFC3H1O60293 1989 aaKnown RBP17.17■□□□□ 0.34
SMAD3-210ENST00000559092 CCDC162PA2VCL2 907 aa17.17■□□□□ 0.34
SMAD3-210ENST00000559092 KIF1CO43896 1103 aaKnown RBP17.17■□□□□ 0.34
SMAD3-210ENST00000559092 STK17BO94768 372 aa17.17■□□□□ 0.34
SMAD3-210ENST00000559092 ETS1P14921 441 aa17.17■□□□□ 0.34
SMAD3-210ENST00000559092 GRIA1P42261 906 aa17.17■□□□□ 0.34
SMAD3-210ENST00000559092 SEPHS1P49903 392 aa17.17■□□□□ 0.34
SMAD3-210ENST00000559092 ACVR1Q04771 509 aa17.17■□□□□ 0.34
SMAD3-210ENST00000559092 FOXM1Q08050 763 aa17.17■□□□□ 0.34
SMAD3-210ENST00000559092 ABHD18Q0P651 414 aa17.17■□□□□ 0.34
SMAD3-210ENST00000559092 C19orf57Q0VDD7 668 aa17.17■□□□□ 0.34
SMAD3-210ENST00000559092 SRSF6Q13247 344 aaKnown RBP17.17■□□□□ 0.34
SMAD3-210ENST00000559092 CCDC38Q502W7 563 aa17.17■□□□□ 0.34
SMAD3-210ENST00000559092 TSTD2Q5T7W7 516 aa17.17■□□□□ 0.34
SMAD3-210ENST00000559092 FAM92BQ6ZTR7 304 aa17.17■□□□□ 0.34
SMAD3-210ENST00000559092 BPHLQ86WA6 291 aaPredicted RBP17.17■□□□□ 0.34
SMAD3-210ENST00000559092 LILRA3Q8N6C8 439 aaPredicted RBP17.17■□□□□ 0.34
SMAD3-210ENST00000559092 GLIS1Q8NBF1 620 aa17.17■□□□□ 0.34
SMAD3-210ENST00000559092 JPH3Q8WXH2 748 aaPredicted RBP17.17■□□□□ 0.34
SMAD3-210ENST00000559092 SLC41A2Q96JW4 573 aa17.17■□□□□ 0.34
SMAD3-210ENST00000559092 RMDN2Q96LZ7 410 aa17.17■□□□□ 0.34
SMAD3-210ENST00000559092 OR52A5Q9H2C5 316 aa17.17■□□□□ 0.34
SMAD3-210ENST00000559092 F8W8V4 182 aa17.16■□□□□ 0.34
SMAD3-210ENST00000559092 IFRD1O00458 451 aaPredicted RBP17.16■□□□□ 0.34
SMAD3-210ENST00000559092 CEP104O60308 925 aa17.16■□□□□ 0.34
SMAD3-210ENST00000559092 ZSCAN5DPP0CG00 497 aa17.16■□□□□ 0.34
SMAD3-210ENST00000559092 PRSS56P0CW18 603 aa17.16■□□□□ 0.34
SMAD3-210ENST00000559092 FOXN2P32314 431 aa17.16■□□□□ 0.34
SMAD3-210ENST00000559092 PLOD1Q02809 727 aaPredicted RBP17.16■□□□□ 0.34
SMAD3-210ENST00000559092 COL9A2Q14055 689 aaPredicted RBP17.16■□□□□ 0.34
SMAD3-210ENST00000559092 DNTTIP2Q5QJE6 756 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms