RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CHST15Q7LFX5 561 aaPredicted RBP17.74■□□□□ 0.43
CLPX-203ENST00000558958 VRK3Q8IV63 474 aa17.74■□□□□ 0.43
CLPX-203ENST00000558958 CFAP206Q8IYR0 622 aa17.74■□□□□ 0.43
CLPX-203ENST00000558958 LILRA3Q8N6C8 439 aaPredicted RBP17.74■□□□□ 0.43
CLPX-203ENST00000558958 TCP10LQ8TDR4 215 aa17.74■□□□□ 0.43
CLPX-203ENST00000558958 TMEM159Q96B96 161 aa17.74■□□□□ 0.43
CLPX-203ENST00000558958 TSNARE1Q96NA8 513 aa17.74■□□□□ 0.43
CLPX-203ENST00000558958 IQCGQ9H095 443 aaKnown RBP17.74■□□□□ 0.43
CLPX-203ENST00000558958 C12orf65Q9H3J6 166 aaKnown RBP17.74■□□□□ 0.43
CLPX-203ENST00000558958 COG4Q9H9E3 785 aa17.74■□□□□ 0.43
CLPX-203ENST00000558958 NMRAL1Q9HBL8 299 aa17.74■□□□□ 0.43
CLPX-203ENST00000558958 TMEM216Q9P0N5 145 aa17.74■□□□□ 0.43
CLPX-203ENST00000558958 FAM8A1Q9UBU6 413 aa17.74■□□□□ 0.43
CLPX-203ENST00000558958 GPSM3Q9Y4H4 160 aa17.74■□□□□ 0.43
CLPX-203ENST00000558958 ACP5P13686 325 aa17.73■□□□□ 0.43
CLPX-203ENST00000558958 CSNK1EP49674 416 aaKnown RBP17.73■□□□□ 0.43
CLPX-203ENST00000558958 ATP6V0D1P61421 351 aa17.73■□□□□ 0.43
CLPX-203ENST00000558958 PLOD1Q02809 727 aaPredicted RBP17.73■□□□□ 0.43
CLPX-203ENST00000558958 PPARDQ03181 441 aa17.73■□□□□ 0.43
CLPX-203ENST00000558958 DMPKQ09013 629 aa17.73■□□□□ 0.43
CLPX-203ENST00000558958 SIM2Q14190 667 aaPredicted RBP17.73■□□□□ 0.43
CLPX-203ENST00000558958 NFE2L1Q14494 772 aa17.73■□□□□ 0.43
CLPX-203ENST00000558958 N4BP2L1Q5TBK1 243 aaPredicted RBP17.73■□□□□ 0.43
CLPX-203ENST00000558958 CYHR1Q6ZMK1 362 aa17.73■□□□□ 0.43
CLPX-203ENST00000558958 FAM83HQ6ZRV2 1179 aaPredicted RBP17.73■□□□□ 0.43
CLPX-203ENST00000558958 RD3Q7Z3Z2 195 aa17.73■□□□□ 0.43
CLPX-203ENST00000558958 PIWIL4Q7Z3Z4 852 aaKnown RBP17.73■□□□□ 0.43
CLPX-203ENST00000558958 PARGQ86W56 976 aa17.73■□□□□ 0.43
CLPX-203ENST00000558958 SPATS2Q86XZ4 545 aaKnown RBP17.73■□□□□ 0.43
CLPX-203ENST00000558958 HID1Q8IV36 788 aa17.73■□□□□ 0.43
CLPX-203ENST00000558958 GLMNQ92990 594 aa17.73■□□□□ 0.43
CLPX-203ENST00000558958 SELENOSQ9BQE4 189 aa17.73■□□□□ 0.43
CLPX-203ENST00000558958 UNKQ9C0B0 810 aaKnown RBP17.73■□□□□ 0.43
CLPX-203ENST00000558958 TMEM74BQ9NUR3 256 aa17.73■□□□□ 0.43
CLPX-203ENST00000558958 PILRBQ9UKJ0 227 aa17.73■□□□□ 0.43
CLPX-203ENST00000558958 EMCNQ9ULC0 261 aa17.73■□□□□ 0.43
CLPX-203ENST00000558958 SDK1Q7Z5N4 2213 aa17.73■□□□□ 0.43
CLPX-203ENST00000558958 SPAG17Q6Q759 2223 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 A0A1B0GTW7 788 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 PRR19A6NJB7 356 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 PRR5-ARHGAP8B1AHC4 643 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 TM9SF1O15321 606 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 ZBTB14O43829 449 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 ZWINTO95229 277 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 RASGRP1O95267 797 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 VCLP18206 1134 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 PREPP48147 710 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 GLRBP48167 497 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 HK3P52790 923 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 NXPH1P58417 271 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 RPA4Q13156 261 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 ACAP2Q15057 778 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 METRNLQ641Q3 311 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 LRRC8EQ6NSJ5 796 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 C16orf46Q6P387 395 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 KLC3Q6P597 504 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 NEK10Q6ZWH5 1172 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 ISCA2Q86U28 154 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 SLC22A15Q8IZD6 547 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 DENND1AQ8TEH3 1009 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 SKA1Q96BD8 255 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 KLC4Q9NSK0 619 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 TRNAU1APQ9NX07 287 aaKnown RBP17.72■□□□□ 0.43
CLPX-203ENST00000558958 SLC17A7Q9P2U7 560 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 KLF15Q9UIH9 416 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 DNAJC16Q9Y2G8 782 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 PLEKHM1Q9Y4G2 1056 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 ST14Q9Y5Y6 855 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 WDFY4Q6ZS81 3184 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 ATXN2Q99700 1313 aaKnown RBP17.72■□□□□ 0.43
CLPX-203ENST00000558958 ZNF318Q5VUA4 2279 aa17.72■□□□□ 0.43
CLPX-203ENST00000558958 SCAMP1O15126 338 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 PLIN3O60664 434 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 TNFP01375 233 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 MPC1LP0DKB6 136 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 GNSP15586 552 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 TFEBP19484 476 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 PDHA2P29803 388 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 ETV4P43268 484 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 KPNA2P52292 529 aaKnown RBP17.71■□□□□ 0.43
CLPX-203ENST00000558958 LRP8Q14114 963 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 TEAD4Q15561 434 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 CCDC153Q494R4 210 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 PEAR1Q5VY43 1037 aaPredicted RBP17.71■□□□□ 0.43
CLPX-203ENST00000558958 SYT12Q8IV01 421 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 MYO1HQ8N1T3 1032 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 FSTL5Q8N475 847 aaPredicted RBP17.71■□□□□ 0.43
CLPX-203ENST00000558958 TMEM151AQ8N4L1 468 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 ANKRD42Q8N9B4 389 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 KIAA1191Q96A73 305 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 PTERQ96BW5 349 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 FAM111AQ96PZ2 611 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 TMEM168Q9H0V1 697 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 DPEP2Q9H4A9 486 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 TFB2MQ9H5Q4 396 aaKnown RBP17.71■□□□□ 0.43
CLPX-203ENST00000558958 SUSD2Q9UGT4 822 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 TSR3Q9UJK0 312 aaKnown RBP17.71■□□□□ 0.43
CLPX-203ENST00000558958 IKZF3Q9UKT9 509 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 KCNK6Q9Y257 313 aa17.71■□□□□ 0.43
CLPX-203ENST00000558958 TNRC6BQ9UPQ9 1833 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms