RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 TRAF3Q13114 568 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 RFTN2Q52LD8 501 aaPredicted RBP10.38□□□□□ -0.75
TPM1-210ENST00000558264 SAMD4BQ5PRF9 694 aaKnown RBP10.38□□□□□ -0.75
TPM1-210ENST00000558264 C8orf82Q6P1X6 216 aaPredicted RBP10.38□□□□□ -0.75
TPM1-210ENST00000558264 SLC2A7Q6PXP3 512 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 MILR1Q7Z6M3 343 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 SPPL2CQ8IUH8 684 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 SLC15A3Q8IY34 581 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 OR2A12Q8NGT7 310 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 CLP1Q92989 425 aaKnown RBP10.38□□□□□ -0.75
TPM1-210ENST00000558264 PPP2R3CQ969Q6 453 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 SLCO4A1Q96BD0 722 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 PYCR2Q96C36 320 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 COPS8Q99627 209 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 SPATA16Q9BXB7 569 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 INTS7Q9NVH2 962 aaKnown RBP10.38□□□□□ -0.75
TPM1-210ENST00000558264 C6orf203Q9P0P8 240 aaPredicted RBP10.38□□□□□ -0.75
TPM1-210ENST00000558264 KLQ9UEF7 1012 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 SCOCQ9UIL1 159 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 RNF11Q9Y3C5 154 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 V9GYQ6 96 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 REV3LO60673 3130 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 NOTCH4Q99466 2003 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 LEFTY1O75610 366 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 TIPRLO75663 272 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 SLC22A3O75751 556 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 RSL1D1O76021 490 aaKnown RBP10.38□□□□□ -0.75
TPM1-210ENST00000558264 PRR35P0CG20 571 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 MTHFD1P11586 935 aaKnown RBP10.38□□□□□ -0.75
TPM1-210ENST00000558264 UQCRBP14927 111 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 CD9P21926 228 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 RPS3P23396 243 aaKnown RBP eCLIP10.38□□□□□ -0.75
TPM1-210ENST00000558264 CSNK1DP48730 415 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 DGKQP52824 942 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 FOLH1Q04609 750 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 CRY1Q16526 586 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 ARSIQ5FYB1 569 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 RARS2Q5T160 578 aaKnown RBP10.38□□□□□ -0.75
TPM1-210ENST00000558264 C12orf76Q8N812 135 aaPredicted RBP10.38□□□□□ -0.75
TPM1-210ENST00000558264 LRRC58Q96CX6 371 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 ECHDC3Q96DC8 303 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 LRRC3BQ96PB8 259 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 HTATIP2Q9BUP3 242 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 NUSAP1Q9BXS6 441 aaKnown RBP10.38□□□□□ -0.75
TPM1-210ENST00000558264 VCX3BQ9H321 246 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 ZFP14Q9HCL3 533 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 SLC52A3Q9NQ40 469 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 SPATS2LQ9NUQ6 558 aaKnown RBP10.38□□□□□ -0.75
TPM1-210ENST00000558264 AURKCQ9UQB9 309 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 AP4S1Q9Y587 144 aa10.38□□□□□ -0.75
TPM1-210ENST00000558264 MYOCOSA0A1B0GUC4 107 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 CCDC154A6NI56 674 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 OR2AG2A6NM03 316 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 POP4O95707 220 aaKnown RBP10.37□□□□□ -0.75
TPM1-210ENST00000558264 CEBPBP17676 345 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 PTPN2P17706 415 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 SLC6A2P23975 617 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 ETV3P41162 512 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 METAP1P53582 386 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 ERVK-8P63133 956 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 RPL38P63173 70 aaKnown RBP10.37□□□□□ -0.75
TPM1-210ENST00000558264 MED21Q13503 144 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 PCBP2Q15366 365 aaKnown RBP eCLIP10.37□□□□□ -0.75
TPM1-210ENST00000558264 TLR1Q15399 786 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 MTX3Q5HYI7 312 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 C6orf52Q5T4I8 152 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 GDPD4Q6W3E5 623 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 Q6ZVL8 140 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 HSD11B1LQ7Z5J1 315 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 DHFR2Q86XF0 187 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 CLHC1Q8NHS4 586 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 SPPL3Q8TCT6 385 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 CANT1Q8WVQ1 401 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 FOXJ1Q92949 421 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 PPWD1Q96BP3 646 aaKnown RBP10.37□□□□□ -0.75
TPM1-210ENST00000558264 RHBDF1Q96CC6 855 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 PDLIM5Q96HC4 596 aaKnown RBP10.37□□□□□ -0.75
TPM1-210ENST00000558264 ZFYVE19Q96K21 471 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 YIPF3Q9GZM5 350 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 ZDHHC4Q9NPG8 344 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 OPTCQ9UBM4 332 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 PTBP2Q9UKA9 531 aaKnown RBP10.37□□□□□ -0.75
TPM1-210ENST00000558264 MAFFQ9ULX9 164 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 ITM2BQ9Y287 266 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 OARD1Q9Y530 152 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 FAM149AA5PLN7 773 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 MAGEA13PA6NCF6 341 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 SLC2A4P14672 509 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 BMPR1AP36894 532 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 RECQLP46063 649 aaPredicted RBP10.37□□□□□ -0.75
TPM1-210ENST00000558264 POLR2JP52435 117 aaKnown RBP10.37□□□□□ -0.75
TPM1-210ENST00000558264 CDKL1Q00532 357 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 PTGR1Q14914 329 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 GSTA3Q16772 222 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 AP5B1Q2VPB7 878 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 ZFP1Q6P2D0 407 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 MACC1Q6ZN28 852 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 TMEM102Q8N9M5 508 aaPredicted RBP10.37□□□□□ -0.75
TPM1-210ENST00000558264 PDPRQ8NCN5 879 aa10.37□□□□□ -0.75
TPM1-210ENST00000558264 PROKR1Q8TCW9 393 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms