RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 WWP1Q9H0M0 922 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 VPS37BQ9H9H4 285 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 LHX9Q9NQ69 397 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 FGF21Q9NSA1 209 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 CRLS1Q9UJA2 301 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 ARL5AQ9Y689 179 aa13.3□□□□□ -0.28
SNRPA1-204ENST00000558020 KCNN4O15554 427 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 ZBTB11O95625 1053 aaPredicted RBP13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 RBP3P10745 1247 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 FOLR1P15328 257 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 F8A1P23610 371 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 CTNNA1P35221 906 aaKnown RBP13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 MARCKSL1P49006 195 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 RWDD2BP57060 319 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 TUBB4BP68371 445 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 OTUD4Q01804 1114 aaKnown RBP13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 DNASE1L3Q13609 305 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 TUBB2AQ13885 445 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 SKIDA1Q1XH10 827 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 GPR33Q49SQ1 333 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 BCL7AQ4VC05 210 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 ANKRD20A2Q5SQ80 823 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 ANKRD20A1Q5TYW2 823 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 ANKRD20A3Q5VUR7 823 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 PWWP2BQ6NUJ5 590 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 TMTC1Q8IUR5 882 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 TEX19Q8NA77 164 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 KRT35Q92764 455 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 LINC00615Q96LM1 132 aaPredicted RBP13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 PANX2Q96RD6 677 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 INSM2Q96T92 566 aaPredicted RBP13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 COPS8Q99627 209 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 MAP3K3Q99759 626 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 TUBB2BQ9BVA1 445 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 OSBPL8Q9BZF1 889 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 KIR3DX1Q9H7L2 352 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 SLC24A2Q9UI40 661 aa13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 MRPS18BQ9Y676 258 aaKnown RBP13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 EPN1Q9Y6I3 576 aaPredicted RBP13.29□□□□□ -0.28
SNRPA1-204ENST00000558020 C17orf113A0A1B0GUU1 675 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 CDC14CA4D256 554 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 OR6C74A6NCV1 312 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 MATN2O00339 956 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 GAPDHSO14556 408 aaPredicted RBP13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 GPR39O43194 453 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 RFPL1O75677 317 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 POLBP06746 335 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 KLK3P07288 261 aaPredicted RBP13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 ITGALP20701 1170 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 PTPN7P35236 360 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 KLRB1Q12918 225 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 PTPRCAPQ14761 206 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 ATP1A1-AS1Q5TC04 95 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 TCTN3Q6NUS6 607 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 D2HGDHQ8N465 521 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 GPR150Q8NGU9 434 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 THAP4Q8WY91 577 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 COL26A1Q96A83 441 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 ALS2CR12Q96Q35 445 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 EPN3Q9H201 632 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 FANCEQ9HB96 536 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 KCND1Q9NSA2 647 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 MAN2B2Q9Y2E5 1009 aa13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 CFAP20Q9Y6A4 193 aaKnown RBP13.28□□□□□ -0.28
SNRPA1-204ENST00000558020 GOLGA6L9A6NEM1 432 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 AGAP14A8MT82 685 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 IFRD1O00458 451 aaPredicted RBP13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 CPNE3O75131 537 aaKnown RBP13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 NTRK1P04629 796 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 EBLN1P0CF75 366 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 ATP1B2P14415 290 aaPredicted RBP13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 PTPN4P29074 926 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 ADRA1AP35348 466 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 PPP1CAP62136 330 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 KCNAB1Q14722 419 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 CAPRIN2Q6IMN6 1127 aaKnown RBP13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 SNX20Q7Z614 316 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 TMEM126BQ8IUX1 230 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 NXPE1Q8N323 547 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 TTC13Q8NBP0 860 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 ACVR1CQ8NER5 493 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 OR4E2Q8NGC2 313 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 HM13Q8TCT9 377 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 CT55Q8WUE5 264 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 LCN9Q8WX39 176 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 SPATA13Q96N96 652 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 TBL1YQ9BQ87 522 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 APOL2Q9BQE5 337 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 SRMSQ9H3Y6 488 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 ACTL8Q9H568 366 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 C10orf88Q9H8K7 445 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 ARNT2Q9HBZ2 717 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 SYTL2Q9HCH5 934 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 SOHLH2Q9NX45 425 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 FAM8A1Q9UBU6 413 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 FKBPLQ9UIM3 349 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 TFR2Q9UP52 801 aa13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 ZNF106Q9H2Y7 1883 aaKnown RBP13.27□□□□□ -0.29
SNRPA1-204ENST00000558020 BTNL10A8MVZ5 291 aa13.26□□□□□ -0.29
SNRPA1-204ENST00000558020 PJA2O43164 708 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms