RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 SLC35G4P0C7Q5 338 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 PDHA2P29803 388 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 CARSP49589 748 aaKnown RBP14.04□□□□□ -0.16
USP3-205ENST00000557884 PPM1FP49593 454 aaPredicted RBP14.04□□□□□ -0.16
USP3-205ENST00000557884 RPE65Q16518 533 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 AMZ1Q400G9 498 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 ZNF658BQ4V348 819 aaPredicted RBP14.04□□□□□ -0.16
USP3-205ENST00000557884 SYTL3Q4VX76 610 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 DUS1LQ6P1R4 473 aaKnown RBP14.04□□□□□ -0.16
USP3-205ENST00000557884 ERMP1Q7Z2K6 904 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 SPRED1Q7Z699 444 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 SLC9B2Q86UD5 537 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 LRRC6Q86X45 466 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 CALML6Q8TD86 181 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 CXorf40BQ96DE9 158 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 CERS2Q96G23 380 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 C9orf72Q96LT7 481 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 INSM2Q96T92 566 aaPredicted RBP14.04□□□□□ -0.16
USP3-205ENST00000557884 SLC38A3Q99624 504 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 RHOXF2Q9BQY4 288 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 STN1Q9H668 368 aaKnown RBP14.04□□□□□ -0.16
USP3-205ENST00000557884 L2HGDHQ9H9P8 463 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 SARS2Q9NP81 518 aaKnown RBP14.04□□□□□ -0.16
USP3-205ENST00000557884 FAM114A2Q9NRY5 505 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 ZDHHC18Q9NUE0 388 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 IMP3Q9NV31 184 aaKnown RBP14.04□□□□□ -0.16
USP3-205ENST00000557884 FBXO5Q9UKT4 447 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 ATXN7L1Q9ULK2 861 aaPredicted RBP14.04□□□□□ -0.16
USP3-205ENST00000557884 CEP295Q9C0D2 2601 aa14.04□□□□□ -0.16
USP3-205ENST00000557884 GOLGA4Q13439 2230 aaKnown RBP14.03□□□□□ -0.16
USP3-205ENST00000557884 B4GAT1O43505 415 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 NIPSNAP2O75323 286 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 GSTM1P09488 218 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 CDK4P11802 303 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 XRCC1P18887 633 aaPredicted RBP14.03□□□□□ -0.16
USP3-205ENST00000557884 RPS3P23396 243 aaKnown RBP eCLIP14.03□□□□□ -0.16
USP3-205ENST00000557884 CCR7P32248 378 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 ABCG1P45844 678 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 MAPK9P45984 424 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 FASLGP48023 281 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 GSTM4Q03013 218 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.03□□□□□ -0.16
USP3-205ENST00000557884 NKAIN2Q5VXU1 208 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 ZNF438Q7Z4V0 828 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 SPNS2Q8IVW8 549 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 PALM2Q8IXS6 379 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 C2CD4AQ8NCU7 369 aaPredicted RBP14.03□□□□□ -0.16
USP3-205ENST00000557884 GSDMBQ8TAX9 411 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 JPH3Q8WXH2 748 aaPredicted RBP14.03□□□□□ -0.16
USP3-205ENST00000557884 C12orf66Q96MD2 445 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 BIRC8Q96P09 236 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 TSSK1BQ9BXA7 367 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 TBC1D10AQ9BXI6 508 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 LRRN3Q9H3W5 708 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 INTS10Q9NVR2 710 aaKnown RBP14.03□□□□□ -0.16
USP3-205ENST00000557884 KCNK4Q9NYG8 393 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 TSR3Q9UJK0 312 aaKnown RBP14.03□□□□□ -0.16
USP3-205ENST00000557884 KLK13Q9UKR3 277 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 VPS9D1Q9Y2B5 631 aa14.03□□□□□ -0.16
USP3-205ENST00000557884 A0A1W2PQM1 296 aa14.02□□□□□ -0.17
USP3-205ENST00000557884 LIN7AO14910 233 aaPredicted RBP14.02□□□□□ -0.17
USP3-205ENST00000557884 HAUS5O94927 633 aa14.02□□□□□ -0.17
USP3-205ENST00000557884 MT-CO3P00414 261 aa14.02□□□□□ -0.17
USP3-205ENST00000557884 ESR1P03372 595 aa14.02□□□□□ -0.17
USP3-205ENST00000557884 MTHFD1P11586 935 aaKnown RBP14.02□□□□□ -0.17
USP3-205ENST00000557884 PKMP14618 531 aaKnown RBP14.02□□□□□ -0.17
USP3-205ENST00000557884 JUPP14923 745 aa14.02□□□□□ -0.17
USP3-205ENST00000557884 PNLIPP16233 465 aa14.02□□□□□ -0.17
USP3-205ENST00000557884 SSTR1P30872 391 aa14.02□□□□□ -0.17
USP3-205ENST00000557884 MAGEA4P43358 317 aa14.02□□□□□ -0.17
USP3-205ENST00000557884 HSPA14Q0VDF9 509 aa14.02□□□□□ -0.17
USP3-205ENST00000557884 CBLBQ13191 982 aa14.02□□□□□ -0.17
USP3-205ENST00000557884 TEX35Q5T0J7 233 aa14.02□□□□□ -0.17
USP3-205ENST00000557884 TEDDM1Q5T9Z0 273 aa14.02□□□□□ -0.17
USP3-205ENST00000557884 CAPRIN2Q6IMN6 1127 aaKnown RBP14.02□□□□□ -0.17
USP3-205ENST00000557884 ZNF449Q6P9G9 518 aa14.02□□□□□ -0.17
USP3-205ENST00000557884 CNSTQ6PJW8 725 aa14.02□□□□□ -0.17
USP3-205ENST00000557884 LMNTD2Q8IXW0 634 aa14.02□□□□□ -0.17
USP3-205ENST00000557884 ZMYND15Q9H091 742 aa14.02□□□□□ -0.17
USP3-205ENST00000557884 OR52A5Q9H2C5 316 aa14.02□□□□□ -0.17
USP3-205ENST00000557884 PCDHB1Q9Y5F3 818 aa14.02□□□□□ -0.17
USP3-205ENST00000557884 IGHV1OR21-1A0A087WYE8 117 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 SLC5A10A0PJK1 596 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 IFRD1O00458 451 aaPredicted RBP14.01□□□□□ -0.17
USP3-205ENST00000557884 PIAS1O75925 651 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 CHRM3P20309 590 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 AOAHP28039 575 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 GABRB3P28472 473 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 GPR3P46089 330 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 MGAT5Q09328 741 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 RPA4Q13156 261 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 SPIDRQ14159 915 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 GPR18Q14330 331 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 FRG1Q14331 258 aaKnown RBP14.01□□□□□ -0.17
USP3-205ENST00000557884 KRT33BQ14525 404 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 NR1D2Q14995 579 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 CDCP2Q5VXM1 449 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 ZNF549Q6P9A3 640 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 TMEM26Q6ZUK4 368 aa14.01□□□□□ -0.17
USP3-205ENST00000557884 USP53Q70EK8 1073 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms