RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 PHF19Q5T6S3 580 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 RNASEH2BQ5TBB1 312 aaKnown RBP12.23□□□□□ -0.45
SLIRP-211ENST00000557623 NKAIN2Q5VXU1 208 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 WDR74Q6RFH5 385 aaPredicted RBP12.23□□□□□ -0.45
SLIRP-211ENST00000557623 IGF2-ASQ6U949 168 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 SYT10Q6XYQ8 523 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 RAB11FIP2Q7L804 512 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 B3GNT8Q7Z7M8 397 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 SDCCAG8Q86SQ7 713 aaPredicted RBP12.23□□□□□ -0.45
SLIRP-211ENST00000557623 HOOK3Q86VS8 718 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 PROSER1Q86XN7 944 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 SLITRK4Q8IW52 837 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 FBXO39Q8N4B4 442 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 CLDN19Q8N6F1 224 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 ZFPM2Q8WW38 1151 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 MFSD3Q96ES6 412 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 CCDC97Q96F63 343 aaPredicted RBP12.23□□□□□ -0.45
SLIRP-211ENST00000557623 SPSB2Q99619 263 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 CMKLR1Q99788 373 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 NUDT22Q9BRQ3 303 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 FOXP3Q9BZS1 431 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 WWP1Q9H0M0 922 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 COG4Q9H9E3 785 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 RDH14Q9HBH5 336 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 SLC40A1Q9NP59 571 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 FAM8A1Q9UBU6 413 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 ZMIZ1Q9ULJ6 1067 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 PSMD13Q9UNM6 376 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 HEBP2Q9Y5Z4 205 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 COLEC10Q9Y6Z7 277 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 BPTFQ12830 3046 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 IGHV5-10-1A0A0J9YXX1 117 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 IFRD1O00458 451 aaPredicted RBP12.22□□□□□ -0.45
SLIRP-211ENST00000557623 NDC80O14777 642 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 LIN7AO14910 233 aaPredicted RBP12.22□□□□□ -0.45
SLIRP-211ENST00000557623 PLD2O14939 933 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 HGSO14964 777 aaPredicted RBP12.22□□□□□ -0.45
SLIRP-211ENST00000557623 FANCGO15287 622 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 BRINP1O60477 761 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 AVILO75366 819 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 VAPBO95292 243 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 POLBP06746 335 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 MTHFD1P11586 935 aaKnown RBP12.22□□□□□ -0.45
SLIRP-211ENST00000557623 AMD1P17707 334 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 NDUFS1P28331 727 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 MAGEA3P43357 314 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 MAPK9P45984 424 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 ERVPABLB-1P60509 514 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 PLOD1Q02809 727 aaPredicted RBP12.22□□□□□ -0.45
SLIRP-211ENST00000557623 IZUMO3Q5VZ72 239 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 KIAA0930Q6ICG6 404 aaPredicted RBP12.22□□□□□ -0.45
SLIRP-211ENST00000557623 CAPRIN2Q6IMN6 1127 aaKnown RBP12.22□□□□□ -0.45
SLIRP-211ENST00000557623 MRNIPQ6NTE8 343 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 MICALCLQ6ZW33 695 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 LRRC6Q86X45 466 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 JAMLQ86YT9 394 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 PLXDC1Q8IUK5 500 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 OTUD6BQ8N6M0 293 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 NAT14Q8WUY8 206 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 NCSTNQ92542 709 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 C12orf66Q96MD2 445 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 ZNF578Q96N58 590 aaPredicted RBP12.22□□□□□ -0.45
SLIRP-211ENST00000557623 INSM2Q96T92 566 aaPredicted RBP12.22□□□□□ -0.45
SLIRP-211ENST00000557623 TBC1D10AQ9BXI6 508 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 SEMA6CQ9H3T2 930 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 IMP3Q9NV31 184 aaKnown RBP12.22□□□□□ -0.45
SLIRP-211ENST00000557623 PRSS21Q9Y6M0 314 aa12.22□□□□□ -0.45
SLIRP-211ENST00000557623 PRMT5O14744 637 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-211ENST00000557623 NDUFS3O75489 264 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 USP1O94782 785 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 UBXN7O94888 489 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 JMJD7P0C870 316 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 THRAP10827 490 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 CSF2RBP32927 897 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 CD151P48509 253 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 GPR18Q14330 331 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 KRT33BQ14525 404 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 SEMA3AQ14563 771 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 MORF4L2Q15014 288 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 TBC1D25Q3MII6 688 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 ANKRD20A4Q4UJ75 823 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 DNAJC21Q5F1R6 531 aaKnown RBP12.21□□□□□ -0.45
SLIRP-211ENST00000557623 RNF187Q5TA31 235 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-211ENST00000557623 KLHL35Q6PF15 583 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 FOXR1Q6PIV2 292 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 CES3Q6UWW8 571 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 ZNF574Q6ZN55 896 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-211ENST00000557623 TMPRSS9Q7Z410 1059 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 ELMO1Q92556 727 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 ZNF669Q96BR6 464 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-211ENST00000557623 CCDC74BQ96LY2 380 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 SLC46A1Q96NT5 459 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 TCF12Q99081 682 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 KRT12Q99456 494 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 CARD6Q9BX69 1037 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 THSD1Q9NS62 852 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 PDP2Q9P2J9 529 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 GNPTGQ9UJJ9 305 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 LOXL2Q9Y4K0 774 aa12.21□□□□□ -0.45
SLIRP-211ENST00000557623 MAD1L1Q9Y6D9 718 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms