RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 GOLGA6L9A6NEM1 432 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 OR5K3A6NET4 321 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 AGAP14A8MT82 685 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 CFAP99D6REC4 459 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 SPAG6O75602 509 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 ITGALP20701 1170 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 PRLHRP49683 370 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 ARL4DP49703 201 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 CSRP3P50461 194 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 XIAPP98170 497 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 AADACL2Q6P093 401 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 C16orf46Q6P387 395 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 RAD9BQ6WBX8 426 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 KIAA1328Q86T90 577 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 NXPE1Q8N323 547 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 LRRC57Q8N9N7 239 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 TTC13Q8NBP0 860 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 ACRBPQ8NEB7 543 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 HM13Q8TCT9 377 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 HEXDCQ8WVB3 486 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 APOBEC4Q8WW27 367 aaKnown RBP13.84□□□□□ -0.19
SNX6-210ENST00000557341 LINC00615Q96LM1 132 aaPredicted RBP13.84□□□□□ -0.19
SNX6-210ENST00000557341 LACRTQ9GZZ8 138 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 KIR3DX1Q9H7L2 352 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 KCND3Q9UK17 655 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 RARRES3Q9UL19 164 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 KCTD3Q9Y597 815 aa13.84□□□□□ -0.19
SNX6-210ENST00000557341 MRPS18BQ9Y676 258 aaKnown RBP13.84□□□□□ -0.19
SNX6-210ENST00000557341 SPENQ96T58 3664 aaKnown RBP13.84□□□□□ -0.19
SNX6-210ENST00000557341 UBA6A0AVT1 1052 aaPredicted RBP13.83□□□□□ -0.2
SNX6-210ENST00000557341 CCNYL3P0C7X3 344 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 SPTBP11277 2137 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 F8A1P23610 371 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 TMPRSS15P98073 1019 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 ACY1Q03154 408 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 SEPT6Q14141 434 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 GSE1Q14687 1217 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 DEFB109BQ30KR1 87 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 ATP1A1-AS1Q5TC04 95 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 ARMC6Q6NXE6 501 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 ARHGEF18Q6ZSZ5 1173 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 PEX26Q7Z412 305 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 SNX20Q7Z614 316 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 KLHDC8BQ8IXV7 354 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 CARFQ8N187 725 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 UBL4BQ8N7F7 174 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 C9orf43Q8TAL5 461 aaPredicted RBP13.83□□□□□ -0.2
SNX6-210ENST00000557341 NAT14Q8WUY8 206 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 ZFPM2Q8WW38 1151 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 RMDN2Q96LZ7 410 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 FCRL4Q96PJ5 515 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 INSM2Q96T92 566 aaPredicted RBP13.83□□□□□ -0.2
SNX6-210ENST00000557341 COPS8Q99627 209 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 MAP3K3Q99759 626 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 ARNT2Q9HBZ2 717 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 HRASLS2Q9NWW9 162 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 SLC24A2Q9UI40 661 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 AMFRQ9UKV5 643 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 HEBP2Q9Y5Z4 205 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 COLEC10Q9Y6Z7 277 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 FER1L5A0AVI2 2057 aa13.83□□□□□ -0.2
SNX6-210ENST00000557341 MIF4GDA9UHW6 222 aaKnown RBP13.82□□□□□ -0.2
SNX6-210ENST00000557341 SGTAO43765 313 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 TIAF1O95411 115 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 EBLN1P0CF75 366 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 FOLR1P15328 257 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 NDUFS1P28331 727 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 MC4RP32245 332 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 MSLNQ13421 630 aaPredicted RBP13.82□□□□□ -0.2
SNX6-210ENST00000557341 KRT33BQ14525 404 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 KCNAB1Q14722 419 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 P3H1Q32P28 736 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 GPR33Q49SQ1 333 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 DENND5AQ6IQ26 1287 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 BPHLQ86WA6 291 aaPredicted RBP13.82□□□□□ -0.2
SNX6-210ENST00000557341 PTRH1Q86Y79 214 aaKnown RBP13.82□□□□□ -0.2
SNX6-210ENST00000557341 SYCE1Q8N0S2 351 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 TXLNBQ8N3L3 684 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 SPDYE1Q8NFV5 336 aaPredicted RBP13.82□□□□□ -0.2
SNX6-210ENST00000557341 CCM2Q9BSQ5 444 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 VPS37BQ9H9H4 285 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 LHX9Q9NQ69 397 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 FGF21Q9NSA1 209 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 PADI1Q9ULC6 663 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 PCDHGA6Q9Y5G7 932 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 NUP210LQ5VU65 1888 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 COL12A1Q99715 3063 aa13.82□□□□□ -0.2
SNX6-210ENST00000557341 PTPN13Q12923 2485 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 C17orf113A0A1B0GUU1 675 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 OR6C74A6NCV1 312 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 C21orf140B9A014 251 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 H7C0S8 307 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 MATN2O00339 956 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 CCL22O00626 93 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 LDB2O43679 373 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 KATNA1O75449 491 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 ZBTB11O95625 1053 aaPredicted RBP13.81□□□□□ -0.2
SNX6-210ENST00000557341 POLBP06746 335 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 ATP1B2P14415 290 aaPredicted RBP13.81□□□□□ -0.2
SNX6-210ENST00000557341 ACRV1P26436 265 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms