RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 LMNTD2Q8IXW0 634 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 CFAP52Q8N1V2 620 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 LILRA3Q8N6C8 439 aaPredicted RBP4.46□□□□□ -1.7
SRP54-212ENST00000556992 KIAA1958Q8N8K9 716 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 MRPL43Q8N983 215 aaKnown RBP4.46□□□□□ -1.7
SRP54-212ENST00000556992 PIK3C3Q8NEB9 887 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 IPMKQ8NFU5 416 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 SPATA22Q8NHS9 363 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 ARRDC2Q8TBH0 407 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 ZNF398Q8TD17 642 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 SREK1Q8WXA9 508 aaKnown RBP4.46□□□□□ -1.7
SRP54-212ENST00000556992 MRPS31Q92665 395 aaKnown RBP4.46□□□□□ -1.7
SRP54-212ENST00000556992 PEX13Q92968 403 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 E2F7Q96AV8 911 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 TADA1Q96BN2 335 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 PABPC5Q96DU9 382 aaKnown RBP4.46□□□□□ -1.7
SRP54-212ENST00000556992 C16orf92Q96LL3 132 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 PSKH2Q96QS6 385 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 RANBP9Q96S59 729 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 KLF6Q99612 283 aaPredicted RBP4.46□□□□□ -1.7
SRP54-212ENST00000556992 SOX7Q9BT81 388 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 FAM167BQ9BTA0 163 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 TUBB6Q9BUF5 446 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 FICDQ9BVA6 458 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 SLC13A1Q9BZW2 595 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 POLR1EQ9GZS1 481 aaKnown RBP4.46□□□□□ -1.7
SRP54-212ENST00000556992 KCNH6Q9H252 994 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 SERHL2Q9H4I8 314 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 MTG2Q9H4K7 406 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 ACTR5Q9H9F9 607 aaPredicted RBP4.46□□□□□ -1.7
SRP54-212ENST00000556992 KIF9Q9HAQ2 790 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 MLXIPLQ9NP71 852 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 NT5MQ9NPB1 228 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 SMYD2Q9NRG4 433 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 GKN1Q9NS71 199 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 FGFR1OP2Q9NVK5 253 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 ZNF212Q9UDV6 495 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 DPP7Q9UHL4 492 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 LSM7Q9UK45 103 aaKnown RBP4.46□□□□□ -1.7
SRP54-212ENST00000556992 TLK1Q9UKI8 766 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 AGO1Q9UL18 857 aaKnown RBP4.46□□□□□ -1.7
SRP54-212ENST00000556992 PHTF1Q9UMS5 762 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 RRP15Q9Y3B9 282 aaKnown RBP4.46□□□□□ -1.7
SRP54-212ENST00000556992 INSL5Q9Y5Q6 135 aa4.46□□□□□ -1.7
SRP54-212ENST00000556992 ZFP37Q9Y6Q3 630 aaPredicted RBP4.46□□□□□ -1.7
SRP54-212ENST00000556992 ZNFX1Q9P2E3 1918 aaKnown RBP4.46□□□□□ -1.7
SRP54-212ENST00000556992 CASP8AP2Q9UKL3 1982 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 TRAV19A0A0A6YYK7 116 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 CXorf51AA0A1B0GTR3 108 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 A0A1B0GVM2 712 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 TYW5A2RUC4 315 aaKnown RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 WDR91A4D1P6 747 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 UNC119BA6NIH7 251 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 H0Y626 953 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 SLC7A4O43246 635 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 HOXA3O43365 443 aaPredicted RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 TGM5O43548 720 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 UGT1A9O60656 530 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 EDF1O60869 148 aaKnown RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 GLRA3O75311 464 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 DCTN3O75935 186 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 ATP5HO75947 161 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 VAPBO95292 243 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 MT-CYBP00156 380 aaPredicted RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 OAS1P00973 400 aaKnown RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 HLA-DQB2P05538 268 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 RB1P06400 928 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 APOA4P06727 396 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 RHOCP08134 193 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 SERPINF2P08697 491 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 CNPP09543 421 aaKnown RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 MBL2P11226 248 aaPredicted RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 CPA3P15088 417 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 GYPEP15421 78 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 HOXB8P17481 243 aaPredicted RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 EN2P19622 333 aaPredicted RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 HLA-DPA1P20036 260 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 NMBRP28336 390 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 CDC25CP30307 473 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 CORO1AP31146 461 aaKnown RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 SLC6A4P31645 630 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 CD86P42081 329 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 ARCN1P48444 511 aaKnown RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 SERPINB8P50452 374 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 LIMK2P53671 638 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 SLC7A9P82251 487 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 UBE3AQ05086 875 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 SLC20A2Q08357 652 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 STX3Q13277 289 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 BMPR2Q13873 1038 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 POU6F1Q14863 301 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 CNGA3Q16281 694 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 MPPE1Q53F39 396 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 INO80DQ53TQ3 878 aaPredicted RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 FAM133BQ5BKY9 247 aaKnown RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 FAM182AQ5T1J6 154 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 RNF219Q5W0B1 726 aaPredicted RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 KIAA0930Q6ICG6 404 aaPredicted RBP4.45□□□□□ -1.7
SRP54-212ENST00000556992 RETSATQ6NUM9 610 aa4.45□□□□□ -1.7
SRP54-212ENST00000556992 ESRP1Q6NXG1 681 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms