RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 DXOO77932 396 aaKnown RBP13.8□□□□□ -0.2
SLIRP-207ENST00000556831 UBXN7O94888 489 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 POLBP06746 335 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 ITGA2BP08514 1039 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 MLNP12872 115 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 NDUFS1P28331 727 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 CASQ1P31415 396 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 FOXN2P32314 431 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 SLC19A1P41440 591 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 TTPAP49638 278 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 LIMK2P53671 638 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 CRADDP78560 199 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 ACVR1Q04771 509 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 KCNJ11Q14654 390 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 PAPD7Q5XG87 772 aaKnown RBP13.8□□□□□ -0.2
SLIRP-207ENST00000556831 METRNLQ641Q3 311 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 TMEM71Q6P5X7 295 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 WDR74Q6RFH5 385 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-207ENST00000556831 PACS1Q6VY07 963 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 PCGF5Q86SE9 256 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 SDCCAG8Q86SQ7 713 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-207ENST00000556831 SLITRK4Q8IW52 837 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 PPIL6Q8IXY8 311 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 PIANPQ8IYJ0 282 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 AGBL5Q8NDL9 886 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 ZNF248Q8NDW4 579 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 TBC1D10AQ9BXI6 508 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 DDX47Q9H0S4 455 aaKnown RBP13.8□□□□□ -0.2
SLIRP-207ENST00000556831 MRM3Q9HC36 420 aaKnown RBP13.8□□□□□ -0.2
SLIRP-207ENST00000556831 SYBUQ9NX95 663 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.8□□□□□ -0.2
SLIRP-207ENST00000556831 ZNF624Q9P2J8 865 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-207ENST00000556831 RNF14Q9UBS8 474 aa13.8□□□□□ -0.2
SLIRP-207ENST00000556831 PIEZO2Q9H5I5 2752 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 UNC13CQ8NB66 2214 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 IGHV5-10-1A0A0J9YXX1 117 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 PRR19A6NJB7 356 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 GOLGA8MH3BSY2 632 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 CCDC188H7C350 402 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 PRSS56P0CW18 603 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 MTHFD1P11586 935 aaKnown RBP13.79□□□□□ -0.2
SLIRP-207ENST00000556831 PLA2G2AP14555 144 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 BRAFP15056 766 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 MPSTP25325 297 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 PSMA3P25788 255 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 CSF2RBP32927 897 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 MAPK10P53779 464 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 DR1Q01658 176 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 ZFP36L1Q07352 338 aaKnown RBP13.79□□□□□ -0.2
SLIRP-207ENST00000556831 SQSTM1Q13501 440 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 BOP1Q14137 746 aaKnown RBP13.79□□□□□ -0.2
SLIRP-207ENST00000556831 GPR18Q14330 331 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 CLCA4Q14CN2 919 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 RPE65Q16518 533 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 MRNIPQ6NTE8 343 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 ARMC6Q6NXE6 501 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 C19orf48Q6RUI8 117 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 IGF2-ASQ6U949 168 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 FAM83HQ6ZRV2 1179 aaPredicted RBP13.79□□□□□ -0.2
SLIRP-207ENST00000556831 SYDE1Q6ZW31 735 aaPredicted RBP13.79□□□□□ -0.2
SLIRP-207ENST00000556831 FAM129CQ86XR2 697 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 KLHL7Q8IXQ5 586 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 MPP5Q8N3R9 675 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 CLDN19Q8N6F1 224 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 RCBTB1Q8NDN9 531 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 SNIP1Q8TAD8 396 aaKnown RBP13.79□□□□□ -0.2
SLIRP-207ENST00000556831 GSDMBQ8TAX9 411 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 CPT1BQ92523 772 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 ELMO1Q92556 727 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 ZNF778Q96MU6 729 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 COG4Q9H9E3 785 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 SLC40A1Q9NP59 571 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 KLHL3Q9UH77 587 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 SOX13Q9UN79 622 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 WDR37Q9Y2I8 494 aa13.79□□□□□ -0.2
SLIRP-207ENST00000556831 TCRBV7S3A2A0A539 114 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 MAGEB16A2A368 324 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 SDR42E2A6NKP2 422 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 TK2O00142 265 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 LIN7AO14910 233 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-207ENST00000556831 CD3EAPO15446 510 aaKnown RBP13.78□□□□□ -0.2
SLIRP-207ENST00000556831 NDUFS3O75489 264 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 RASSF9O75901 435 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 THRAP10827 490 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 HGFP14210 728 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 TYRP1P17643 537 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 MAGEA6P43360 314 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 ABCG1P45844 678 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 CAPZBP47756 277 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 PLOD1Q02809 727 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-207ENST00000556831 RPA4Q13156 261 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 TMED2Q15363 201 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 GLIPR1L2Q4G1C9 344 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 RNF187Q5TA31 235 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-207ENST00000556831 BROXQ5VW32 411 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 PTRHD1Q6GMV3 140 aaKnown RBP13.78□□□□□ -0.2
SLIRP-207ENST00000556831 MCUQ8NE86 351 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 GABPB2Q8TAK5 448 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-207ENST00000556831 KCNE4Q8WWG9 221 aa13.78□□□□□ -0.2
SLIRP-207ENST00000556831 ZDHHC12Q96GR4 267 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms