RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 NDUFAF5Q5TEU4 345 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 PLXDC2Q6UX71 529 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 TRMT1LQ7Z2T5 733 aaKnown RBP3.95□□□□□ -1.78
FCF1-208ENST00000556814 PIWIL4Q7Z3Z4 852 aaKnown RBP3.95□□□□□ -1.78
FCF1-208ENST00000556814 LDB1Q86U70 411 aaPredicted RBP3.95□□□□□ -1.78
FCF1-208ENST00000556814 CUZD1Q86UP6 607 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 AACSQ86V21 672 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 DNAAF5Q86Y56 855 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 PTOV1Q86YD1 416 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 SCML4Q8N228 414 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 MINDY1Q8N5J2 469 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 SYT2Q8N9I0 419 aaPredicted RBP3.95□□□□□ -1.78
FCF1-208ENST00000556814 KBTBD3Q8NAB2 608 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 PAPD5Q8NDF8 572 aaKnown RBP3.95□□□□□ -1.78
FCF1-208ENST00000556814 MTERF3Q96E29 417 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 UHRF2Q96PU4 802 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 NEK1Q96PY6 1258 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 TXLNGYQ9BZA5 131 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 MMP28Q9H239 520 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 UPF2Q9HAU5 1272 aaKnown RBP3.95□□□□□ -1.78
FCF1-208ENST00000556814 HHATLQ9HCP6 504 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 ZFP57Q9NU63 452 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 TAAR2Q9P1P5 351 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 CPSF2Q9P2I0 782 aaKnown RBP3.95□□□□□ -1.78
FCF1-208ENST00000556814 NFKBIL1Q9UBC1 381 aaPredicted RBP3.95□□□□□ -1.78
FCF1-208ENST00000556814 MORF4L1Q9UBU8 362 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 ZNF112Q9UJU3 913 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 FAF1Q9UNN5 650 aaPredicted RBP3.95□□□□□ -1.78
FCF1-208ENST00000556814 PPIEQ9UNP9 301 aaKnown RBP3.95□□□□□ -1.78
FCF1-208ENST00000556814 ASTN2O75129 1339 aaPredicted RBP3.95□□□□□ -1.78
FCF1-208ENST00000556814 ZNF541Q9H0D2 1346 aa3.95□□□□□ -1.78
FCF1-208ENST00000556814 DOCK7Q96N67 2140 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 MAGEB17A8MXT2 336 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 P2RY10O00398 339 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 ADAMDEC1O15204 470 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 IPO8O15397 1037 aaKnown RBP3.94□□□□□ -1.78
FCF1-208ENST00000556814 ADAM20O43506 726 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 SSX4O60224 188 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 LMX1BO60663 402 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 CTSVO60911 334 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 WISP2O76076 250 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 H1F0P07305 194 aaKnown RBP3.94□□□□□ -1.78
FCF1-208ENST00000556814 NR2F1P10589 423 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 IL11P20809 199 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 ANOS1P23352 680 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 MARK3P27448 753 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 HSD17B4P51659 736 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 CALD1Q05682 793 aaKnown RBP3.94□□□□□ -1.78
FCF1-208ENST00000556814 PLA2G7Q13093 441 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 GRAPQ13588 217 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 NR1D2Q14995 579 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 BMP2KLQ5H9B9 411 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 ALS2CLQ60I27 953 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 GPR139Q6DWJ6 353 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 KLC3Q6P597 504 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 GPALPP1Q8IXQ4 340 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 GUF1Q8N442 669 aaKnown RBP3.94□□□□□ -1.78
FCF1-208ENST00000556814 PPFIBP2Q8ND30 876 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 RBM15BQ8NDT2 890 aaKnown RBP3.94□□□□□ -1.78
FCF1-208ENST00000556814 SLC24A4Q8NFF2 622 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 PTPMT1Q8WUK0 201 aaPredicted RBP3.94□□□□□ -1.78
FCF1-208ENST00000556814 SEMA4DQ92854 862 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 ZNF622Q969S3 477 aaKnown RBP eCLIP3.94□□□□□ -1.78
FCF1-208ENST00000556814 ST6GAL2Q96JF0 529 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 FAM81BQ96LP2 452 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 AP1M1Q9BXS5 423 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 MIOSQ9NXC5 875 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 SCN5AQ14524 2016 aa3.94□□□□□ -1.78
FCF1-208ENST00000556814 LOC102723996A0A087X1L8 192 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 GPR75-ASB3A0A0A6YYF3 556 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 MED19A0JLT2 244 aaPredicted RBP3.93□□□□□ -1.78
FCF1-208ENST00000556814 ELOVL7A1L3X0 281 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 C5orf60A6NFR6 353 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 SH2B2O14492 632 aaPredicted RBP3.93□□□□□ -1.78
FCF1-208ENST00000556814 TSPAN1O60635 241 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 CSPG5O95196 566 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 CAVIN2O95810 425 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 MMP15P51511 669 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 RASA2Q15283 850 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 RBBP5Q15291 538 aaKnown RBP3.93□□□□□ -1.78
FCF1-208ENST00000556814 TMEM266Q2M3C6 531 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 STPG1Q5TH74 334 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 C19orf48Q6RUI8 117 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 SMIM29Q86T20 159 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 PRPF39Q86UA1 669 aaKnown RBP3.93□□□□□ -1.78
FCF1-208ENST00000556814 DCUN1D3Q8IWE4 304 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 AVL9Q8NBF6 648 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 CCDC191Q8NCU4 936 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 LPGAT1Q92604 370 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 ERLEC1Q96DZ1 483 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 NODALQ96S42 347 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 ABHD1Q96SE0 405 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 CDRT15Q96T59 188 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 SLX1AQ9BQ83 275 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 PPIL3Q9H2H8 161 aaKnown RBP3.93□□□□□ -1.78
FCF1-208ENST00000556814 APOBEC3GQ9HC16 384 aaKnown RBP3.93□□□□□ -1.78
FCF1-208ENST00000556814 ZBTB20Q9HC78 741 aaPredicted RBP3.93□□□□□ -1.78
FCF1-208ENST00000556814 ZNF334Q9HCZ1 680 aaPredicted RBP3.93□□□□□ -1.78
FCF1-208ENST00000556814 SLC35C2Q9NQQ7 365 aa3.93□□□□□ -1.78
FCF1-208ENST00000556814 SLC38A7Q9NVC3 462 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms