RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 HMGB4Q8WW32 186 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 FAM131CQ96AQ9 280 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 SKA1Q96BD8 255 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 RILPQ96NA2 401 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 LRRC37BQ96QE4 947 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 FAM126AQ9BYI3 521 aaPredicted RBP13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 TRIM39Q9HCM9 518 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 ARMCX1Q9P291 453 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 CIDEBQ9UHD4 219 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 MMP17Q9ULZ9 603 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 KRBA1A5PL33 1030 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 SYCE1LA8MT33 242 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 MATN2O00339 956 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 SLC31A1O15431 190 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 SNX2O60749 519 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 GPC4O75487 556 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 TARSP26639 723 aaKnown RBP13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 GDF5P43026 501 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 FOXA1P55317 472 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 GAS6Q14393 721 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 E2F5Q15329 346 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 ZXDCQ2QGD7 858 aaPredicted RBP13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 ADAMTSL2Q86TH1 951 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 ZNF687Q8N1G0 1237 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 DCBLD1Q8N8Z6 715 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 TP53I13Q8NBR0 393 aaPredicted RBP13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 CFAP61Q8NHU2 1237 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 COX14Q96I36 57 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 HIC2Q96JB3 615 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 OR52B2Q96RD2 323 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 KCNA7Q96RP8 456 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 NMUR2Q9GZQ4 415 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 EBF1Q9UH73 591 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 HAO1Q9UJM8 370 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 DUSP12Q9UNI6 340 aa13.56□□□□□ -0.24
EFCAB11-212ENST00000556639 ALOX15P16050 662 aaPredicted RBP13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 CDK3Q00526 305 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 ABRQ12979 859 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 TMEM259Q4ZIN3 620 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 EOGTQ5NDL2 527 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 SPATS2Q86XZ4 545 aaKnown RBP13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 CCM2Q9BSQ5 444 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 C1QTNF2Q9BXJ5 285 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 SLC17A9Q9BYT1 436 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 FOXQ1Q9C009 403 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 TM7SF3Q9NS93 570 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 PDE10AQ9Y233 779 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 CA5BQ9Y2D0 317 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 NUAK1O60285 661 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 ATG13O75143 517 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 SKAP2O75563 359 aaPredicted RBP13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 FTH1P02794 183 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 FUCA1P04066 466 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 RPS17P08708 135 aaKnown RBP13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 EPHA3P29320 983 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 HSPA7P48741 367 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 TPMTP51580 245 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 ALDH18A1P54886 795 aaKnown RBP13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 RPS21P63220 83 aaKnown RBP13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 CLCQ05315 142 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 ZBTB16Q05516 673 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 SETDB1Q15047 1291 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 GALNTL6Q49A17 601 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 FBXO43Q4G163 708 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 PLEKHS1Q5SXH7 462 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 EPGNQ6UW88 154 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 ADAMTSL4Q6UY14 1074 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 RAB44Q7Z6P3 723 aaPredicted RBP13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 CFAP206Q8IYR0 622 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 LMAN1LQ9HAT1 526 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 ZNF225Q9UK10 706 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 PCTPQ9UKL6 214 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 OARD1Q9Y530 152 aa13.55□□□□□ -0.24
EFCAB11-212ENST00000556639 E2F3O00716 465 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 FCHO1O14526 889 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 CBSLP0DN79 551 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 ACADMP11310 421 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 CBSP35520 551 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 SGCGQ13326 291 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 FZD5Q13467 585 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 CCSMST1Q4G0I0 132 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 ZNF658BQ4V348 819 aaPredicted RBP13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 ANKS6Q68DC2 871 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 UBE2R2Q712K3 238 aaPredicted RBP13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 CLNKQ7Z7G1 428 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 FRMD1Q8N878 549 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 ASZ1Q8WWH4 475 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 ASB11Q8WXH4 323 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 CDK15Q96Q40 435 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 EGFL8Q99944 293 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 TMEM79Q9BSE2 394 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 WWP1Q9H0M0 922 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 KDM4CQ9H3R0 1056 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 MID1IP1Q9NPA3 183 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 NUDT4Q9NZJ9 180 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 KLHL42Q9P2K6 505 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 SLC23A2Q9UGH3 650 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 ZFP69BQ9UJL9 534 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 PTGDR2Q9Y5Y4 395 aa13.54□□□□□ -0.24
EFCAB11-212ENST00000556639 SLC5A10A0PJK1 596 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms