RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 RILPL1Q5EBL4 403 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 GCNT6Q5T4J0 391 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 ADALQ6DHV7 355 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 SLC35E4Q6ICL7 350 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 KLC3Q6P597 504 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 DENND5BQ6ZUT9 1274 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 DGLUCYQ7Z3D6 616 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 KLHDC8BQ8IXV7 354 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 CRYBG2Q8N1P7 616 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 L3MBTL4Q8NA19 623 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 OR10V1Q8NGI7 309 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 FCAMRQ8WWV6 532 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 ERLEC1Q96DZ1 483 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 STAMBPL1Q96FJ0 436 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 PRMT6Q96LA8 375 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-221ENST00000556534 KIFC3Q9BVG8 833 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 SPATC1LQ9H0A9 340 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 ZBTB20Q9HC78 741 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-221ENST00000556534 HHATLQ9HCP6 504 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 SLC38A7Q9NVC3 462 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 ARHGEF38Q9NXL2 777 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 TERF2IPQ9NYB0 399 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 LARSQ9P2J5 1176 aaKnown RBP4.25□□□□□ -1.73
SCFD1-221ENST00000556534 ZNF624Q9P2J8 865 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-221ENST00000556534 HACL1Q9UJ83 578 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 PCDHGB4Q9UN71 923 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 WBP11Q9Y2W2 641 aaKnown RBP4.25□□□□□ -1.73
SCFD1-221ENST00000556534 JRKLQ9Y4A0 524 aa4.25□□□□□ -1.73
SCFD1-221ENST00000556534 LOC102723996A0A087X1L8 192 aa4.24□□□□□ -1.73
SCFD1-221ENST00000556534 NR3C1P04150 777 aa4.24□□□□□ -1.73
SCFD1-221ENST00000556534 CKMT2P17540 419 aa4.24□□□□□ -1.73
SCFD1-221ENST00000556534 CDKN1AP38936 164 aa4.24□□□□□ -1.73
SCFD1-221ENST00000556534 RGS19P49795 217 aa4.24□□□□□ -1.73
SCFD1-221ENST00000556534 ARSEP51690 589 aa4.24□□□□□ -1.73
SCFD1-221ENST00000556534 ASPRV1Q53RT3 343 aa4.24□□□□□ -1.73
SCFD1-221ENST00000556534 SLC27A1Q6PCB7 646 aa4.24□□□□□ -1.73
SCFD1-221ENST00000556534 LDB1Q86U70 411 aaPredicted RBP4.24□□□□□ -1.73
SCFD1-221ENST00000556534 OR2T12Q8NG77 320 aa4.24□□□□□ -1.73
SCFD1-221ENST00000556534 WDR20Q8TBZ3 569 aa4.24□□□□□ -1.73
SCFD1-221ENST00000556534 SLC22A18Q96BI1 424 aa4.24□□□□□ -1.73
SCFD1-221ENST00000556534 SENP5Q96HI0 755 aaPredicted RBP4.24□□□□□ -1.73
SCFD1-221ENST00000556534 C16orf70Q9BSU1 422 aa4.24□□□□□ -1.73
SCFD1-221ENST00000556534 ABHD6Q9BV23 337 aa4.24□□□□□ -1.73
SCFD1-221ENST00000556534 TEX12Q9BXU0 123 aa4.24□□□□□ -1.73
SCFD1-221ENST00000556534 KCNK15Q9H427 330 aa4.24□□□□□ -1.73
SCFD1-221ENST00000556534 PSD3Q9NYI0 1048 aa4.24□□□□□ -1.73
SCFD1-221ENST00000556534 NPAP1Q9NZP6 1156 aa4.24□□□□□ -1.73
SCFD1-221ENST00000556534 RHCGQ9UBD6 479 aa4.24□□□□□ -1.73
SCFD1-221ENST00000556534 PMS2P5A8MQ11 134 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 AVILO75366 819 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 PAK4O96013 591 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-221ENST00000556534 AMBPP02760 352 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 H1F0P07305 194 aaKnown RBP4.23□□□□□ -1.73
SCFD1-221ENST00000556534 ACP2P11117 423 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 VPREB1P12018 145 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 ACTN2P35609 894 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 EIF2DP41214 584 aaKnown RBP4.23□□□□□ -1.73
SCFD1-221ENST00000556534 SIRPAP78324 504 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 GRAPQ13588 217 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 KRT33BQ14525 404 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 NTRK2Q16620 822 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 GRTP1Q5TC63 336 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 SFMBT2Q5VUG0 894 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 ZNF449Q6P9G9 518 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 CEACAM20Q6UY09 585 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 TRPT1Q86TN4 253 aaKnown RBP4.23□□□□□ -1.73
SCFD1-221ENST00000556534 ADIPOR2Q86V24 386 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 CEP57Q86XR8 500 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 GPALPP1Q8IXQ4 340 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 STPG4Q8N801 248 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 PTPMT1Q8WUK0 201 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-221ENST00000556534 DAZLQ92904 295 aaKnown RBP4.23□□□□□ -1.73
SCFD1-221ENST00000556534 SLC47A1Q96FL8 570 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 RSRC1Q96IZ7 334 aaKnown RBP4.23□□□□□ -1.73
SCFD1-221ENST00000556534 FAM81BQ96LP2 452 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 PSD2Q9BQI7 771 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 CCDC68Q9H2F9 335 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 CHMP1AQ9HD42 196 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-221ENST00000556534 PTTG2Q9NZH5 202 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 MDFICQ9P1T7 246 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 GAB2Q9UQC2 676 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 TMEM5Q9Y2B1 443 aa4.23□□□□□ -1.73
SCFD1-221ENST00000556534 SPIN1Q9Y657 262 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-221ENST00000556534 KIF26BQ2KJY2 2108 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 MAGEB17A8MXT2 336 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 SMIM1B2RUZ4 78 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 SLC22A2O15244 555 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 SSX4O60224 188 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 CIDEAO60543 219 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 IGHV4-38-2P0DP08 117 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 PSMC4P43686 418 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 STK4Q13043 487 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 PLA2G7Q13093 441 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 ARHGAP17Q68EM7 881 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 DHRS7BQ6IAN0 325 aaPredicted RBP4.22□□□□□ -1.73
SCFD1-221ENST00000556534 TEX38Q6PEX7 206 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 TMCO3Q6UWJ1 677 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 LINGO4Q6UY18 593 aa4.22□□□□□ -1.73
SCFD1-221ENST00000556534 RBMS3Q6XE24 437 aaKnown RBP4.22□□□□□ -1.73
SCFD1-221ENST00000556534 BRINP3Q76B58 766 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms