RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 CASP14P31944 242 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 MAN1A1P33908 653 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 SPINT3P49223 89 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 CCL11P51671 97 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 PGDP52209 483 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 HHEXQ03014 270 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 MAP7Q14244 749 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 KRT81Q14533 505 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 KIR2DS5Q14953 304 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 IQCB1Q15051 598 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 PDK2Q15119 407 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 HADHQ16836 314 aaKnown RBP9.85□□□□□ -0.83
SCFD1-220ENST00000556486 CCDC122Q5T0U0 273 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 TICAM1Q8IUC6 712 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 RASGRP3Q8IV61 690 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 HDAC11Q96DB2 347 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 SMIM14Q96QK8 99 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 RIOK2Q9BVS4 552 aaKnown RBP9.85□□□□□ -0.83
SCFD1-220ENST00000556486 NUP85Q9BW27 656 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.85□□□□□ -0.83
SCFD1-220ENST00000556486 CARD9Q9H257 536 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 TRIT1Q9H3H1 467 aaKnown RBP9.85□□□□□ -0.83
SCFD1-220ENST00000556486 PCDH9Q9HC56 1237 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 TBC1D29Q9UFV1 150 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 LCMT1Q9UIC8 334 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 LNPEPQ9UIQ6 1025 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 TRIM33Q9UPN9 1127 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 A0A087X0T9 212 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 FADS2P1A8MWK0 482 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 ANKRD66B4E2M5 251 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 TOX3O15405 576 aaPredicted RBP9.84□□□□□ -0.83
SCFD1-220ENST00000556486 NUAK1O60285 661 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 SNX2O60749 519 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 CREG1O75629 220 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 CLDN7O95471 211 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 DDAH2O95865 285 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 MMP2P08253 660 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 FAM153BP0C7A2 387 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 FAM228BP0C875 321 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 F3P13726 295 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 EPHB1P54762 984 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 DCDC1P59894 354 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 UBE2IP63279 158 aaKnown RBP9.84□□□□□ -0.83
SCFD1-220ENST00000556486 ZBED6P86452 979 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 DSC2Q02487 901 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 NIPAL4Q0D2K0 466 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 SEMA5AQ13591 1074 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 RAPSNQ13702 412 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 C21orf62-AS1Q17RA5 79 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 TDRD12Q587J7 1177 aaKnown RBP9.84□□□□□ -0.83
SCFD1-220ENST00000556486 ANKRD20A8PQ5CZ79 823 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 PDPK2PQ6A1A2 396 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 FAM199XQ6PEV8 388 aaPredicted RBP9.84□□□□□ -0.83
SCFD1-220ENST00000556486 VSIG1Q86XK7 387 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 MAP7D3Q8IWC1 876 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 CT55Q8WUE5 264 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 BTBD6Q96KE9 485 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 OR6C1Q96RD1 312 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 SLC25A23Q9BV35 468 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 SPATA9Q9BWV2 254 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 FAM83DQ9H4H8 585 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 ACTL8Q9H568 366 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 STN1Q9H668 368 aaKnown RBP9.84□□□□□ -0.83
SCFD1-220ENST00000556486 AKIRIN1Q9H9L7 192 aaPredicted RBP9.84□□□□□ -0.83
SCFD1-220ENST00000556486 RBM22Q9NW64 420 aaKnown RBP eCLIP9.84□□□□□ -0.83
SCFD1-220ENST00000556486 SIDT1Q9NXL6 827 aaKnown RBP9.84□□□□□ -0.83
SCFD1-220ENST00000556486 CAPN11Q9UMQ6 739 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 KCNK6Q9Y257 313 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 CHKBQ9Y259 395 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 ITPR3Q14573 2671 aa9.84□□□□□ -0.83
SCFD1-220ENST00000556486 PDZD2O15018 2839 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 C1orf232A0A0U1RR37 186 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 CHUKO15111 745 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 INPP4BO15327 924 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 PROSCO94903 275 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 NDUFA10O95299 355 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 C9P02748 559 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 ATP1A1P05023 1023 aaKnown RBP9.83□□□□□ -0.84
SCFD1-220ENST00000556486 HLA-DQB2P05538 268 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 TYRP1P17643 537 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 HNRNPH3P31942 346 aaKnown RBP9.83□□□□□ -0.84
SCFD1-220ENST00000556486 ANP32AP39687 249 aaKnown RBP9.83□□□□□ -0.84
SCFD1-220ENST00000556486 IFI35P80217 286 aaPredicted RBP9.83□□□□□ -0.84
SCFD1-220ENST00000556486 GBE1Q04446 702 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 PPIDQ08752 370 aaKnown RBP9.83□□□□□ -0.84
SCFD1-220ENST00000556486 ITKQ08881 620 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 DNASE1L3Q13609 305 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 IL10RAQ13651 578 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 SLC14A2Q15849 920 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 FAM69BQ5VUD6 431 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 ALKBH5Q6P6C2 394 aaKnown RBP9.83□□□□□ -0.84
SCFD1-220ENST00000556486 VHLLQ6RSH7 139 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 SLC9B2Q86UD5 537 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 PQLC3Q8N755 202 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 CNTD1Q8N815 330 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 Q8NA96 180 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 CCHCR1Q8TD31 782 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 TADA1Q96BN2 335 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 EID2BQ96D98 161 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 TGM7Q96PF1 710 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms