RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 LRRN3Q9H3W5 708 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 OSGEPL1Q9H4B0 414 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 ZFAND3Q9H8U3 227 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 CATSPERZQ9NTU4 200 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 CPNE7Q9UBL6 633 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 ACSL5Q9ULC5 683 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 CLCA2Q9UQC9 943 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 SNX24Q9Y343 169 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 MRFAP1Q9Y605 127 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 ACACAQ13085 2346 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 DSPP15924 2871 aaKnown RBP9.46□□□□□ -0.9
SRP54-210ENST00000556380 PTPRBP23467 1997 aa9.46□□□□□ -0.9
SRP54-210ENST00000556380 COL27A1Q8IZC6 1860 aaPredicted RBP9.45□□□□□ -0.9
SRP54-210ENST00000556380 IGHV1OR21-1A0A087WYE8 117 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 PRAMEF33A0A0G2JMD5 474 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 A0A1W2PNU3 283 aaPredicted RBP9.45□□□□□ -0.9
SRP54-210ENST00000556380 OR52A4PA6NMU1 304 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 RHPN2P1A8MT19 583 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 EFCAB8A8MWE9 144 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 GOLGA8KD6RF30 607 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 GOLGA8TH3BQL2 631 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 KIF2AO00139 706 aaPredicted RBP9.45□□□□□ -0.9
SRP54-210ENST00000556380 BANF1O75531 89 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 URI1O94763 535 aaPredicted RBP9.45□□□□□ -0.9
SRP54-210ENST00000556380 USP1O94782 785 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 RPLP0P05388 317 aaKnown RBP9.45□□□□□ -0.9
SRP54-210ENST00000556380 GSTM1P09488 218 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 SLC2A4P14672 509 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 JUPP14923 745 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 DRG2P55039 364 aaKnown RBP9.45□□□□□ -0.9
SRP54-210ENST00000556380 GSTM4Q03013 218 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 DHX9Q08211 1270 aaKnown RBP9.45□□□□□ -0.9
SRP54-210ENST00000556380 RPE65Q16518 533 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 ISXQ2M1V0 245 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 TYSND1Q2T9J0 566 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 CAPRIN2Q6IMN6 1127 aaKnown RBP9.45□□□□□ -0.9
SRP54-210ENST00000556380 NEPROQ6NW34 567 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 CASC4Q6P4E1 433 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 ZNF574Q6ZN55 896 aaPredicted RBP9.45□□□□□ -0.9
SRP54-210ENST00000556380 CENPUQ71F23 418 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 TMPRSS9Q7Z410 1059 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 CFAP206Q8IYR0 622 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 Q8N9G6 341 aaPredicted RBP9.45□□□□□ -0.9
SRP54-210ENST00000556380 WDR48Q8TAF3 677 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 HM13Q8TCT9 377 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.45□□□□□ -0.9
SRP54-210ENST00000556380 TRIM44Q96DX7 344 aaPredicted RBP9.45□□□□□ -0.9
SRP54-210ENST00000556380 STAMBPL1Q96FJ0 436 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 SNF8Q96H20 258 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 INSM2Q96T92 566 aaPredicted RBP9.45□□□□□ -0.9
SRP54-210ENST00000556380 TCF12Q99081 682 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 EBNA1BP2Q99848 306 aaKnown RBP9.45□□□□□ -0.9
SRP54-210ENST00000556380 P2RY12Q9H244 342 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 OR52A5Q9H2C5 316 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 UCK1Q9HA47 277 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 SLC40A1Q9NP59 571 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 GRHL1Q9NZI5 618 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 ANAPC5Q9UJX4 755 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 RPS6KL1Q9Y6S9 549 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 FAM169AQ9Y6X4 670 aa9.45□□□□□ -0.9
SRP54-210ENST00000556380 ZFC3H1O60293 1989 aaKnown RBP9.44□□□□□ -0.9
SRP54-210ENST00000556380 PKD1L2Q7Z442 2459 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 SLC5A10A0PJK1 596 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 TRABD2BA6NFA1 517 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 PDZK1P1A8MUH7 402 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 D6RAR5 112 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 E7ESA3 106 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 PRMT5O14744 637 aaPredicted RBP9.44□□□□□ -0.9
SRP54-210ENST00000556380 CSO75390 466 aaKnown RBP9.44□□□□□ -0.9
SRP54-210ENST00000556380 PDHA2P29803 388 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 ALDH4A1P30038 563 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 PBLDP30039 288 aaPredicted RBP9.44□□□□□ -0.9
SRP54-210ENST00000556380 TTPAP49638 278 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 ADARP55265 1226 aaKnown RBP9.44□□□□□ -0.9
SRP54-210ENST00000556380 HHEXQ03014 270 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 ZFP36L1Q07352 338 aaKnown RBP9.44□□□□□ -0.9
SRP54-210ENST00000556380 RPA4Q13156 261 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 TUBB2AQ13885 445 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 TRADDQ15628 312 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 SEPT7Q16181 437 aaKnown RBP9.44□□□□□ -0.9
SRP54-210ENST00000556380 CLPPQ16740 277 aaPredicted RBP9.44□□□□□ -0.9
SRP54-210ENST00000556380 BBS9Q3SYG4 887 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 DNAJC21Q5F1R6 531 aaKnown RBP9.44□□□□□ -0.9
SRP54-210ENST00000556380 AARS2Q5JTZ9 985 aaKnown RBP9.44□□□□□ -0.9
SRP54-210ENST00000556380 NKAIN2Q5VXU1 208 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 MRNIPQ6NTE8 343 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 RBM44Q6ZP01 1051 aaKnown RBP9.44□□□□□ -0.9
SRP54-210ENST00000556380 B3GNT8Q7Z7M8 397 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 SLC9B2Q86UD5 537 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 ZNF761Q86XN6 746 aaPredicted RBP9.44□□□□□ -0.9
SRP54-210ENST00000556380 CILP2Q8IUL8 1156 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 AVL9Q8NBF6 648 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 SEC14L1Q92503 715 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 LPGAT1Q92604 370 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 ZNF669Q96BR6 464 aaPredicted RBP9.44□□□□□ -0.9
SRP54-210ENST00000556380 GRAMD1AQ96CP6 724 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 RMDN2Q96LZ7 410 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 BIRC8Q96P09 236 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 TTC1Q99614 292 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 TUBB2BQ9BVA1 445 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms