RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 CTSLP07711 333 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 CCNB1P14635 433 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 PRLRP16471 622 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 ZFXP17010 805 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-238ENST00000556288 ENGP17813 658 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 IL4RP24394 825 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 CTSSP25774 331 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 CASRP41180 1078 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 DPP6P42658 865 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 MMP13P45452 471 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 MTNR1BP49286 362 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 NEK3P51956 506 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 VAV2P52735 878 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 EPHB1P54762 984 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 POLR2LP62875 67 aaKnown RBP4.67□□□□□ -1.66
ATXN3-238ENST00000556288 IL9RQ01113 521 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 SLC25A11Q02978 314 aaKnown RBP4.67□□□□□ -1.66
ATXN3-238ENST00000556288 HHEXQ03014 270 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 DUSP2Q05923 314 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 SLC10A7Q0GE19 358 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 SEMA3BQ13214 749 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 DPYSQ14117 519 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 TFDP2Q14188 446 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 ACAP2Q15057 778 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 ADRM1Q16186 407 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 DPYSL2Q16555 572 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 INAVAQ3KP66 663 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 SPATS1Q496A3 300 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 INO80DQ53TQ3 878 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-238ENST00000556288 C19orf54Q5BKX5 351 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 SLC45A4Q5BKX6 768 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 ZNF805Q5CZA5 627 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 STPG1Q5TH74 334 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 ZNF585AQ6P3V2 769 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 DARS2Q6PI48 645 aaKnown RBP4.67□□□□□ -1.66
ATXN3-238ENST00000556288 FAM111BQ6SJ93 734 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 FAM180AQ6UWF9 173 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 LAYNQ6UX15 382 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 MFSD7Q6UXD7 560 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 CYP4V2Q6ZWL3 525 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-238ENST00000556288 ERN2Q76MJ5 926 aaKnown RBP4.67□□□□□ -1.66
ATXN3-238ENST00000556288 GGNQ86UU5 652 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 CAMK1DQ8IU85 385 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 LRRC8AQ8IWT6 810 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 D2HGDHQ8N465 521 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 NPWQ8N729 165 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 UBL4BQ8N7F7 174 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 GLB1L3Q8NCI6 653 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-238ENST00000556288 C1orf162Q8NEQ5 155 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-238ENST00000556288 CADM4Q8NFZ8 388 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 OR5M3Q8NGP4 307 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 CXorf40AQ8TE69 158 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 CASKIN2Q8WXE0 1202 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 P3H4Q92791 437 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 ISG20Q96AZ6 181 aaKnown RBP4.67□□□□□ -1.66
ATXN3-238ENST00000556288 SKA1Q96BD8 255 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 SMAD5Q99717 465 aaKnown RBP4.67□□□□□ -1.66
ATXN3-238ENST00000556288 EDEM2Q9BV94 578 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 LRRC19Q9H756 370 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 ATP13A3Q9H7F0 1226 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 CD248Q9HCU0 757 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 TMEM9BQ9NQ34 198 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 HAUS2Q9NVX0 235 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 ZNF212Q9UDV6 495 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 MOSPD1Q9UJG1 213 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 PILRBQ9UKJ0 227 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 FZD4Q9ULV1 537 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 NENFQ9UMX5 172 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 PACSIN2Q9UNF0 486 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-238ENST00000556288 CA5BQ9Y2D0 317 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 TCAF1Q9Y4C2 921 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 PCDHGA5Q9Y5G8 931 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 MRFAP1Q9Y605 127 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 SLC30A1Q9Y6M5 507 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 KIF26BQ2KJY2 2108 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 SCN8AQ9UQD0 1980 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 RP1P56715 2156 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 WDR87Q6ZQQ6 2873 aa4.67□□□□□ -1.66
ATXN3-238ENST00000556288 PLXNB3Q9ULL4 1909 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 OTOGLQ3ZCN5 2332 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 KLHL33A6NCF5 533 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 KCNK1O00180 336 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 MATN3O15232 486 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 KRT86O43790 486 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 MFSD11O43934 449 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 ZNF821O75541 412 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-238ENST00000556288 GJB3O75712 270 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 MTA2O94776 668 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 SERPINF2P08697 491 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 CCDC175P0C221 793 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 ADRB3P13945 408 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 CTPS1P17812 591 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 CCNCP24863 283 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 CD27P26842 260 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 CD38P28907 300 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 SERPINA4P29622 427 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 ADSLP30566 484 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-238ENST00000556288 MAN1A1P33908 653 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 DRD3P35462 400 aa4.66□□□□□ -1.66
ATXN3-238ENST00000556288 TNNT3P45378 269 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms