RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	FADS3	Q9Y5Q0	445 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	KPNA5	O15131	536 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	C1R	P00736	705 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	ASL	P04424	464 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	CKMT2	P17540	419 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	MYL12A	P19105	171 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	CCNA2	P20248	432 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	MSH3	P20585	1137 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	ARNT	P27540	789 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	SLC11A1	P49279	550 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	PFKP	Q01813	784 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	PTS	Q03393	145 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	KRR1	Q13601	381 aa	Known RBP	12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	CRY1	Q16526	586 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	VPS35	Q96QK1	796 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	CRISPLD1	Q9H336	500 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	MEAF6	Q9HAF1	191 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	MRM3	Q9HC36	420 aa	Known RBP	12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	DYRK1B	Q9Y463	629 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	OR51F1	A6NGY5	319 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	SNTN	A6NMZ2	147 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	EOMES	O95936	686 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	EFNA1	P20827	205 aa	Predicted RBP	12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	CDH3	P22223	829 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	SLC7A1	P30825	629 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	CCR4	P51679	360 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	TRAP1	Q12931	704 aa	Known RBP	12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	RNASE12	Q5GAN4	147 aa	Known RBP	12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	ABRAXAS1	Q6UWZ7	409 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	CLYBL	Q8N0X4	340 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	RTL3	Q8N8U3	475 aa	Known RBP	12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	SUSD3	Q96L08	255 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	TRMO	Q9BU70	441 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	ZNF385D	Q9H6B1	395 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	PCDH10	Q9P2E7	1040 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	ARID1A	O14497	2285 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029		A0A0J9YYE9	177 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	PRORSD1P	A6NEY8	169 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	HHLA1	C9JL84	531 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	IFRD1	O00458	451 aa	Predicted RBP	12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	BCL2L1	Q07817	233 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	TTC23	Q5W5X9	447 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	EGFLAM	Q63HQ2	1017 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	ZCCHC8	Q6NZY4	707 aa	Known RBP	12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	TMEM102	Q8N9M5	508 aa	Predicted RBP	12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	MCOLN3	Q8TDD5	553 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	RELT	Q969Z4	430 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	CLIP3	Q96DZ5	547 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	GPR62	Q9BZJ7	368 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	CLEC4M	Q9H2X3	399 aa	Predicted RBP	12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	TOR3A	Q9H497	397 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	ZDHHC6	Q9H6R6	413 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	ASB8	Q9H765	288 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	PNPLA3	Q9NST1	481 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	SPG21	Q9NZD8	308 aa		12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	CNOT6	Q9ULM6	557 aa	Known RBP	12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	SAMHD1	Q9Y3Z3	626 aa	Known RBP	12.13	□□□□□ -0.47
TMPO-212	ENST00000556029	ICE1	Q9Y2F5	2266 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	KLHL33	A6NCF5	533 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	ULK1	O75385	1050 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	CNP	P09543	421 aa	Known RBP	12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	UMPS	P11172	480 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	IMPDH1	P20839	514 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	MAPK1	P28482	360 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	PRKG2	Q13237	762 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	RANBP10	Q6VN20	620 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	ARMCX6	Q7L4S7	300 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	ADHFE1	Q8IWW8	467 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	METTL25	Q8N6Q8	603 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	AMER2	Q8N7J2	671 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	STAG3L4	Q8TBR4	150 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	TP53INP1	Q96A56	240 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	TREX1	Q9NSU2	369 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029		A0A1B0GW55	424 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	VILL	O15195	856 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	CCL16	O15467	120 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	DUX4L2	P0CJ85	424 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	DUX4L3	P0CJ86	424 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	DUX4L4	P0CJ87	422 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	DUX4L5	P0CJ88	424 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	DUX4L6	P0CJ89	424 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	DUX4L7	P0CJ90	424 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	CYBA	P13498	195 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	EPOR	P19235	508 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	TACR2	P21452	398 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	PPP2R1B	P30154	601 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	KRT20	P35900	424 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	UPP1	Q16831	310 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	VPS26B	Q4G0F5	336 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	C14orf80	Q86SX3	495 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	PIM3	Q86V86	326 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	LRRC49	Q8IUZ0	686 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	SVOP	Q8N4V2	548 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	SETD9	Q8NE22	299 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	OR2T34	Q8NGX1	318 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	OR2T3	Q8NH03	318 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	TOP1MT	Q969P6	601 aa		12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	MAEL	Q96JY0	434 aa	Known RBP	12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	RPL10L	Q96L21	214 aa	Known RBP	12.12	□□□□□ -0.47
TMPO-212	ENST00000556029	TBATA	Q96M53	351 aa		12.12	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms