RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 PNLIPP16233 465 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 PORP16435 677 aaPredicted RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 CA4P22748 312 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 PSMB4P28070 264 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 PTPN4P29074 926 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 ARRB1P49407 418 aaPredicted RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 MTTPP55157 894 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 HNRNPKP61978 463 aaKnown RBP eCLIP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 INSM1Q01101 510 aaPredicted RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 SEMA5AQ13591 1074 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 ITGA9Q13797 1035 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 CYLC2Q14093 348 aaPredicted RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 PYCR3Q53H96 274 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 SPDYAQ5MJ70 313 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 PRAMEF14Q5SWL7 426 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 ZCCHC8Q6NZY4 707 aaKnown RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 TMEM53Q6P2H8 277 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 FAM47EQ6ZV65 393 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 ZNF534Q76KX8 674 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 HEATR4Q86WZ0 1026 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 ZNF547Q8IVP9 402 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 KBTBD2Q8IY47 623 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 ST13P4Q8IZP2 240 aaPredicted RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 RBFAQ8N0V3 343 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 CYP4X1Q8N118 509 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 FSTL5Q8N475 847 aaPredicted RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 TRAM1L1Q8N609 369 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 DCBLD1Q8N8Z6 715 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 PRELID2Q8N945 189 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 GLIS1Q8NBF1 620 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 LPCAT1Q8NF37 534 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 MGARPQ8TDB4 240 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 EPS8L3Q8TE67 593 aaKnown RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 PRR11Q96HE9 360 aaPredicted RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 APOLD1Q96LR9 279 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 LRRC37BQ96QE4 947 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 RANBP9Q96S59 729 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 INSM2Q96T92 566 aaPredicted RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 FAM118BQ9BPY3 351 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 SIKE1Q9BRV8 207 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 ADGRE3Q9BY15 652 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 EPB41L1Q9H4G0 881 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 SLC32A1Q9H598 525 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 PFDN4Q9NQP4 134 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 EIF2B3Q9NR50 452 aaKnown RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 TUBA8Q9NY65 449 aaPredicted RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 NDUFA13Q9P0J0 144 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 STX18Q9P2W9 335 aaKnown RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 GULP1Q9UBP9 304 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 TSR3Q9UJK0 312 aaKnown RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 APPL1Q9UKG1 709 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 RIMKLBQ9ULI2 386 aa3.86□□□□□ -1.79
LINC00648-202ENST00000555985 RIF1Q5UIP0 2472 aaKnown RBP3.86□□□□□ -1.79
LINC00648-202ENST00000555985 RASGRF2O14827 1237 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 TP73O15350 636 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 KRT36O76013 467 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 PSMG1O95456 288 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 AP2A1O95782 977 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 FGF1P05230 155 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 PIM1P11309 404 aaPredicted RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 JUNDP17535 347 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 CKMT2P17540 419 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 MAGEA3P43357 314 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 CHRNA4P43681 627 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 B4GALNT1Q00973 533 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 DMPKQ09013 629 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 OLIG2Q13516 323 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 PEX6Q13608 980 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ACOX1Q15067 660 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 LLGL1Q15334 1064 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 TAF1AQ15573 450 aaPredicted RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 KCTD19Q17RG1 926 aaPredicted RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 INAVAQ3KP66 663 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 UAP1L1Q3KQV9 507 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ACSBG2Q5FVE4 666 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 DUPD1Q68J44 220 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 TTC27Q6P3X3 843 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 C3orf62Q6ZUJ4 267 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ADAT2Q7Z6V5 191 aaKnown RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ADGRG6Q86SQ4 1221 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 SLC35F3Q8IY50 421 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 EID2Q8N6I1 236 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 CCDC110Q8TBZ0 833 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 RHBDD1Q8TEB9 315 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ATG4AQ8WYN0 398 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 SLCO2A1Q92959 643 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 SCAMP4Q969E2 229 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 TSACCQ96A04 125 aaPredicted RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 NMD3Q96D46 503 aaKnown RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 CNDP2Q96KP4 475 aaKnown RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 MAGEB18Q96M61 343 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 PPP1R2P1Q96PQ5 205 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 MYOCQ99972 504 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 TRIM51Q9BSJ1 452 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 TMEM121Q9BTD3 319 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 DUSP23Q9BVJ7 150 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 RIOK2Q9BVS4 552 aaKnown RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ROPN1BQ9BZX4 212 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms