RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.37□□□□□ -0.27
SNX6-203ENST00000555416 DDX47Q9H0S4 455 aaKnown RBP13.37□□□□□ -0.27
SNX6-203ENST00000555416 OR52A5Q9H2C5 316 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 COG4Q9H9E3 785 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNX6-203ENST00000555416 AHCTF1Q8WYP5 2266 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 MN1Q10571 1320 aaPredicted RBP13.37□□□□□ -0.27
SNX6-203ENST00000555416 CFAP99D6REC4 459 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 GOLGA8MH3BSY2 632 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 HGSO14964 777 aaPredicted RBP13.36□□□□□ -0.27
SNX6-203ENST00000555416 C9P02748 559 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 HALP42357 657 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 NPY2RP49146 381 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 CDK16Q00536 496 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 TLE3Q04726 772 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 SRSF6Q13247 344 aaKnown RBP13.36□□□□□ -0.27
SNX6-203ENST00000555416 TRA2AQ13595 282 aaKnown RBP eCLIP13.36□□□□□ -0.27
SNX6-203ENST00000555416 TGIF1Q15583 401 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 PAPD7Q5XG87 772 aaKnown RBP13.36□□□□□ -0.27
SNX6-203ENST00000555416 PACS1Q6VY07 963 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 CREG2Q8IUH2 290 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 BMPERQ8N8U9 685 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 AVL9Q8NBF6 648 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 ZNF248Q8NDW4 579 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 LKAAEAR1Q8TD35 194 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 MFSD3Q96ES6 412 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 CAPZA3Q96KX2 299 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 NAP1L3Q99457 506 aaPredicted RBP13.36□□□□□ -0.27
SNX6-203ENST00000555416 DPYSL5Q9BPU6 564 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 KIFC1Q9BW19 673 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 ZMYND15Q9H091 742 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 ACSL5Q9ULC5 683 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 LHX6Q9UPM6 363 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 PCDHGA7Q9Y5G6 932 aa13.36□□□□□ -0.27
SNX6-203ENST00000555416 LOC400499M0QZD8 3231 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 C17orf113A0A1B0GUU1 675 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 IQCF5A8MTL0 148 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 GOLGA8KD6RF30 607 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 GOLGA8TH3BQL2 631 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 NVLO15381 856 aaKnown RBP13.35□□□□□ -0.27
SNX6-203ENST00000555416 CAPN5O15484 640 aaPredicted RBP13.35□□□□□ -0.27
SNX6-203ENST00000555416 F7P08709 466 aaPredicted RBP13.35□□□□□ -0.27
SNX6-203ENST00000555416 SLC35G4P0C7Q5 338 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 AMD1P17707 334 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 MLLT3P42568 568 aaPredicted RBP13.35□□□□□ -0.27
SNX6-203ENST00000555416 ABCG1P45844 678 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 PRAMEP78395 509 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 CLN3Q13286 438 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 LAMB3Q13751 1172 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 ITIH4Q14624 930 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 BRD3Q15059 726 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 NLRP9Q7RTR0 991 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 ZFAND4Q86XD8 727 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 AGBL5Q8NDL9 886 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 PHC3Q8NDX5 983 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 KCNE4Q8WWG9 221 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 PEX13Q92968 403 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 ART4Q93070 314 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 TMEM159Q96B96 161 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 RNF31Q96EP0 1072 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 SGSM3Q96HU1 749 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 C9orf72Q96LT7 481 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 TGM7Q96PF1 710 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 IL22Q9GZX6 179 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 APMAPQ9HDC9 416 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 IL1RAPL1Q9NZN1 696 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 BFARQ9NZS9 450 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 SOX13Q9UN79 622 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 B3GALT1Q9Y5Z6 326 aa13.35□□□□□ -0.27
SNX6-203ENST00000555416 MGAQ8IWI9 3026 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 KLHL33A6NCF5 533 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 EFCAB7A8K855 629 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 BHMG1C9JSJ3 638 aaPredicted RBP13.34□□□□□ -0.27
SNX6-203ENST00000555416 RRP8O43159 456 aaKnown RBP13.34□□□□□ -0.27
SNX6-203ENST00000555416 KLK10O43240 276 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 AP2A2O94973 939 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 VAPBO95292 243 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 TCP1P17987 556 aaKnown RBP13.34□□□□□ -0.27
SNX6-203ENST00000555416 ITGB6P18564 788 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 CSTF2P33240 577 aaKnown RBP eCLIP13.34□□□□□ -0.27
SNX6-203ENST00000555416 NSG1P42857 185 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 PTGIRP43119 386 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 CAPZBP47756 277 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 ARCN1P48444 511 aaKnown RBP13.34□□□□□ -0.27
SNX6-203ENST00000555416 FNTAP49354 379 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 FASTKD1Q53R41 847 aaKnown RBP13.34□□□□□ -0.27
SNX6-203ENST00000555416 FAM92BQ6ZTR7 304 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 FAM129CQ86XR2 697 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 PLXDC1Q8IUK5 500 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 SPNS2Q8IVW8 549 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 RBM12BQ8IXT5 1001 aaKnown RBP13.34□□□□□ -0.27
SNX6-203ENST00000555416 NAT8LQ8N9F0 302 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 PPM1MQ96MI6 270 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 FCRL3Q96P31 734 aaPredicted RBP13.34□□□□□ -0.27
SNX6-203ENST00000555416 NAPGQ99747 312 aaPredicted RBP13.34□□□□□ -0.27
SNX6-203ENST00000555416 CTRCQ99895 268 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 EPB41L1Q9H4G0 881 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 KIR3DX1Q9H7L2 352 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 SLC24A2Q9UI40 661 aa13.34□□□□□ -0.27
SNX6-203ENST00000555416 SDK2Q58EX2 2172 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms