RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 SLC38A3Q99624 504 aa10.4□□□□□ -0.74
TMEM260-206ENST00000555046 CARD6Q9BX69 1037 aa10.4□□□□□ -0.74
TMEM260-206ENST00000555046 PHACTR1Q9C0D0 580 aa10.4□□□□□ -0.74
TMEM260-206ENST00000555046 CCDC68Q9H2F9 335 aa10.4□□□□□ -0.74
TMEM260-206ENST00000555046 UCK1Q9HA47 277 aa10.4□□□□□ -0.74
TMEM260-206ENST00000555046 EPB41L5Q9HCM4 733 aa10.4□□□□□ -0.74
TMEM260-206ENST00000555046 PRDM8Q9NQV8 689 aa10.4□□□□□ -0.74
TMEM260-206ENST00000555046 FAM114A2Q9NRY5 505 aa10.4□□□□□ -0.74
TMEM260-206ENST00000555046 C20orf96Q9NUD7 363 aaPredicted RBP10.4□□□□□ -0.74
TMEM260-206ENST00000555046 INTS10Q9NVR2 710 aaKnown RBP10.4□□□□□ -0.74
TMEM260-206ENST00000555046 TOR4AQ9NXH8 423 aa10.4□□□□□ -0.74
TMEM260-206ENST00000555046 SLC23A2Q9UGH3 650 aa10.4□□□□□ -0.74
TMEM260-206ENST00000555046 GNPTGQ9UJJ9 305 aa10.4□□□□□ -0.74
TMEM260-206ENST00000555046 PLEKHM1Q9Y4G2 1056 aa10.4□□□□□ -0.74
TMEM260-206ENST00000555046 COMMD10Q9Y6G5 202 aa10.4□□□□□ -0.74
TMEM260-206ENST00000555046 CREBBPQ92793 2442 aa10.4□□□□□ -0.74
TMEM260-206ENST00000555046 NBPF19A0A087WUL8 3843 aa10.4□□□□□ -0.75
TMEM260-206ENST00000555046 ZCWPW2A0A1B0GU75 182 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 OR51F1A6NGY5 319 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 GPR39O43194 453 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 KDM1AO60341 852 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 ESR1P03372 595 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 APOA4P06727 396 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 GSTA2P09210 222 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 SLC35G4P0C7Q5 338 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 RPS3P23396 243 aaKnown RBP eCLIP10.39□□□□□ -0.75
TMEM260-206ENST00000555046 CD151P48509 253 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 PLTPP55058 493 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 GPLD1P80108 840 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 B4GALNT1Q00973 533 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 HHEXQ03014 270 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 PDIA2Q13087 525 aaKnown RBP10.39□□□□□ -0.75
TMEM260-206ENST00000555046 SQSTM1Q13501 440 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 KRT33BQ14525 404 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 TMED2Q15363 201 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 SMAD1Q15797 465 aaKnown RBP10.39□□□□□ -0.75
TMEM260-206ENST00000555046 GUSBP11Q6P575 273 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 KLHL35Q6PF15 583 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 CES3Q6UWW8 571 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 CYS1Q717R9 158 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 TMPRSS7Q7RTY8 843 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 RAB44Q7Z6P3 723 aaPredicted RBP10.39□□□□□ -0.75
TMEM260-206ENST00000555046 CILP2Q8IUL8 1156 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 ZNF843Q8N446 348 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 KYQ8NBH2 561 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 OR10G6Q8NH81 332 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 ASZ1Q8WWH4 475 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 ART4Q93070 314 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 UBL7Q96S82 380 aaPredicted RBP10.39□□□□□ -0.75
TMEM260-206ENST00000555046 CCDC3Q9BQI4 270 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 LRRC1Q9BTT6 524 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 DPH5Q9H2P9 285 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 CLMPQ9H6B4 373 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 PPANQ9NQ55 473 aaKnown RBP10.39□□□□□ -0.75
TMEM260-206ENST00000555046 POT1Q9NUX5 634 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 CPNE7Q9UBL6 633 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 MTRF1LQ9UGC7 380 aaKnown RBP10.39□□□□□ -0.75
TMEM260-206ENST00000555046 ANKRD36A6QL64 1941 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 PLXNB3Q9ULL4 1909 aa10.39□□□□□ -0.75
TMEM260-206ENST00000555046 DOCK9Q9BZ29 2069 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 MGAQ8IWI9 3026 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 TRBV23OR9-2A0A075B6M9 112 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 LY6G6EA0A0G2JKS1 128 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 FAM221BA6H8Z2 402 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 A6NCN8 305 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 E7ESA3 106 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 ZNF500O60304 480 aaPredicted RBP10.38□□□□□ -0.75
TMEM260-206ENST00000555046 MT-CO3P00414 261 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 RPL10P27635 214 aaKnown RBP10.38□□□□□ -0.75
TMEM260-206ENST00000555046 ALDH4A1P30038 563 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 ELK3P41970 407 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 EPHA4P54764 986 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 GUCY2DQ02846 1103 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 SPIDRQ14159 915 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 NFE2L1Q14494 772 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 NR1D2Q14995 579 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 TYSND1Q2T9J0 566 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 PLA2G4EQ3MJ16 856 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 UGT3A1Q6NUS8 523 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 DHRS13Q6UX07 377 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 RBM44Q6ZP01 1051 aaKnown RBP10.38□□□□□ -0.75
TMEM260-206ENST00000555046 KIAA0408Q6ZU52 694 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 ZNF438Q7Z4V0 828 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 PIM3Q86V86 326 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 KCNMB4Q86W47 210 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 CHCHD4Q8N4Q1 142 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 CLDN19Q8N6F1 224 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 PNPLA1Q8N8W4 532 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 ELMO1Q92556 727 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 CDKL2Q92772 493 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 CCDC74AQ96AQ1 378 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 TMEM159Q96B96 161 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 CRELD1Q96HD1 420 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 TMEM74Q96NL1 305 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 FCRL3Q96P31 734 aaPredicted RBP10.38□□□□□ -0.75
TMEM260-206ENST00000555046 DEPDC7Q96QD5 511 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 GFM1Q96RP9 751 aaKnown RBP10.38□□□□□ -0.75
TMEM260-206ENST00000555046 LRRN3Q9H3W5 708 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 NSMCE4AQ9NXX6 385 aa10.38□□□□□ -0.75
TMEM260-206ENST00000555046 KCNK4Q9NYG8 393 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms