RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 C9orf64Q5T6V5 341 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 ZDHHC21Q8IVQ6 265 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 MCCC1Q96RQ3 725 aaPredicted RBP13.78□□□□□ -0.2
VTI1B-204ENST00000554659 C1orf21Q9H246 121 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 UGT1A7Q9HAW7 530 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 UGT1A10Q9HAW8 530 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 UGT1A8Q9HAW9 530 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 C12orf4Q9NQ89 552 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 MAGEB17A8MXT2 336 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 SCN2BO60939 215 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 AMD1P17707 334 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 LRRC3Q9BY71 257 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 C1orf109Q9NX04 203 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 ABHD14A-ACY1A0A1B0GW23 586 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 FAM159BA6NKW6 160 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 CDC40O60508 579 aaKnown RBP eCLIP13.78□□□□□ -0.2
VTI1B-204ENST00000554659 CCNB2O95067 398 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 OR1D2P34982 312 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 GPD2P43304 727 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 MINDY2Q8NBR6 621 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 ZNF248Q8NDW4 579 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 FCRL5Q96RD9 977 aa13.78□□□□□ -0.2
VTI1B-204ENST00000554659 GFM1Q96RP9 751 aaKnown RBP13.78□□□□□ -0.2
VTI1B-204ENST00000554659 YTHDF1Q9BYJ9 559 aaKnown RBP13.78□□□□□ -0.2
VTI1B-204ENST00000554659 MOV10Q9HCE1 1003 aaKnown RBP13.78□□□□□ -0.2
VTI1B-204ENST00000554659 MRPS23Q9Y3D9 190 aaKnown RBP13.78□□□□□ -0.2
VTI1B-204ENST00000554659 VIRMAQ69YN4 1812 aaKnown RBP13.78□□□□□ -0.2
VTI1B-204ENST00000554659 M0R2N6 131 aa13.77□□□□□ -0.2
VTI1B-204ENST00000554659 TOP3BO95985 862 aaKnown RBP13.77□□□□□ -0.2
VTI1B-204ENST00000554659 RPLP0P05388 317 aaKnown RBP13.77□□□□□ -0.2
VTI1B-204ENST00000554659 PPM1AP35813 382 aa13.77□□□□□ -0.2
VTI1B-204ENST00000554659 SCNN1AP37088 669 aa13.77□□□□□ -0.2
VTI1B-204ENST00000554659 EEFSECP57772 596 aaKnown RBP13.77□□□□□ -0.2
VTI1B-204ENST00000554659 LILRA4P59901 499 aa13.77□□□□□ -0.2
VTI1B-204ENST00000554659 AP1S1P61966 158 aa13.77□□□□□ -0.2
VTI1B-204ENST00000554659 MED27Q6P2C8 311 aa13.77□□□□□ -0.2
VTI1B-204ENST00000554659 ERI1Q8IV48 349 aaKnown RBP13.77□□□□□ -0.2
VTI1B-204ENST00000554659 DCBLD1Q8N8Z6 715 aa13.77□□□□□ -0.2
VTI1B-204ENST00000554659 FAM129BQ96TA1 746 aa13.77□□□□□ -0.2
VTI1B-204ENST00000554659 GRIP1Q9Y3R0 1128 aa13.77□□□□□ -0.2
VTI1B-204ENST00000554659 RBMXL2O75526 392 aaKnown RBP13.77□□□□□ -0.2
VTI1B-204ENST00000554659 HTR1BP28222 390 aa13.77□□□□□ -0.2
VTI1B-204ENST00000554659 ALDH3A2P51648 485 aa13.77□□□□□ -0.2
VTI1B-204ENST00000554659 CEBPGP53567 150 aa13.77□□□□□ -0.2
VTI1B-204ENST00000554659 MYBPC3Q14896 1274 aa13.77□□□□□ -0.2
VTI1B-204ENST00000554659 TAF1AQ15573 450 aaPredicted RBP13.77□□□□□ -0.2
VTI1B-204ENST00000554659 CPNE8Q86YQ8 564 aa13.77□□□□□ -0.2
VTI1B-204ENST00000554659 MPP5Q8N3R9 675 aa13.77□□□□□ -0.2
VTI1B-204ENST00000554659 NTAN1Q96AB6 310 aa13.77□□□□□ -0.2
VTI1B-204ENST00000554659 FCRL4Q96PJ5 515 aa13.77□□□□□ -0.2
VTI1B-204ENST00000554659 ACAT2Q9BWD1 397 aa13.77□□□□□ -0.2
VTI1B-204ENST00000554659 EVLQ9UI08 416 aaPredicted RBP13.77□□□□□ -0.2
VTI1B-204ENST00000554659 A0A1B0GVM2 712 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 TCAF2A6NFQ2 919 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 GTPBP1O00178 669 aaKnown RBP13.77□□□□□ -0.21
VTI1B-204ENST00000554659 CCL22O00626 93 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 PIGRP01833 764 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 PGRP06401 933 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 IMPDH1P20839 514 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 CBX5P45973 191 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 ZNF132P52740 706 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 HERVK_113P63132 956 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 SRSF11Q05519 484 aaKnown RBP13.77□□□□□ -0.21
VTI1B-204ENST00000554659 NAE1Q13564 534 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 FRMD7Q6ZUT3 714 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 TNFAIP8L1Q8WVP5 186 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 SLC38A4Q969I6 547 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 TUBGCP5Q96RT8 1024 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 ERVK-6Q9BXR3 956 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 SOHLH2Q9NX45 425 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 MAP4K5Q9Y4K4 846 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 TIE1P35590 1138 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 CCR10P46092 362 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 ERVK-8P63133 956 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 DPY19L1Q2PZI1 675 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 LAPTM4BQ86VI4 370 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 XAGE5Q8WWM1 108 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 TMCO6Q96DC7 493 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 FZD8Q9H461 694 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 ERN1O75460 977 aaKnown RBP13.77□□□□□ -0.21
VTI1B-204ENST00000554659 GNRH1P01148 92 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 OR4Q2P0C623 313 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 CDH1P12830 882 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 ATF4P18848 351 aaPredicted RBP13.77□□□□□ -0.21
VTI1B-204ENST00000554659 IRF9Q00978 393 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 SLC10A6Q3KNW5 377 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 RBM48Q5RL73 367 aaKnown RBP13.77□□□□□ -0.21
VTI1B-204ENST00000554659 THOC7Q6I9Y2 204 aaKnown RBP13.77□□□□□ -0.21
VTI1B-204ENST00000554659 CXorf57Q6NSI4 855 aaKnown RBP13.77□□□□□ -0.21
VTI1B-204ENST00000554659 USP43Q70EL4 1123 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 EMID1Q96A84 441 aaPredicted RBP13.77□□□□□ -0.21
VTI1B-204ENST00000554659 ART5Q96L15 291 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 FEM1AQ9BSK4 669 aa13.77□□□□□ -0.21
VTI1B-204ENST00000554659 MCIDASD6RGH6 385 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 ATF6P18850 670 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 GABRR2P28476 465 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 RPS14P62263 151 aaKnown RBP13.76□□□□□ -0.21
VTI1B-204ENST00000554659 PCDH1Q08174 1060 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 KCNJ11Q14654 390 aa13.76□□□□□ -0.21
VTI1B-204ENST00000554659 ZBTB6Q15916 424 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms