RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 ATP7AQ04656 1500 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 LCMT2O60294 686 aaKnown RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ATP9AO75110 1047 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 MYBL2P10244 700 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 YBX3P16989 372 aaKnown RBP eCLIP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 RPL10P27635 214 aaKnown RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 TRIM23P36406 574 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 CLEC12BQ2HXU8 276 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 GPR157Q5UAW9 335 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 FAM180BQ6P0A1 224 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 SHC4Q6S5L8 630 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 AMIGO2Q86SJ2 522 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 OR9K2Q8NGE7 335 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 CLPTM1LQ96KA5 538 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 MXRA8Q9BRK3 442 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 NIFKQ9BYG3 293 aaKnown RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 OPA3Q9H6K4 179 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 REREQ9P2R6 1566 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 MYBPHLA2RUH7 354 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 MRASO14807 208 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 S100A6P06703 90 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ITGA5P08648 1049 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ATP4AP20648 1035 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 MMP8P22894 467 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 GNRHRP30968 328 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 RPL21P46778 160 aaKnown RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 PPIDQ08752 370 aaKnown RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF543Q08ER8 600 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 C2orf80Q0P641 193 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ABRAXAS1Q6UWZ7 409 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 ZDHHC13Q8IUH4 622 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 DHRSXQ8N5I4 330 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 H1FXQ92522 213 aaKnown RBP3.27□□□□□ -1.89
SYNE2-212ENST00000554584 HCN3Q9P1Z3 774 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 RIPK3Q9Y572 518 aa3.27□□□□□ -1.89
SYNE2-212ENST00000554584 E7ENQ6 273 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 CLOCKO15516 846 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 NUDT21O43809 227 aaKnown RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ARSAP15289 507 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF136P52737 540 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 DEFA5Q01523 94 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 HYIQ5T013 277 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ACBD4Q8NC06 268 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 LCN9Q8WX39 176 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 C1QTNF1Q9BXJ1 281 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 DSN1Q9H410 356 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 DYNLRB1Q9NP97 96 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 WHRNQ9P202 907 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 SALL3Q9BXA9 1300 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 CH25HO95992 272 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 HPCAL1P37235 193 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 STAT5AP42229 794 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ID4P47928 161 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 GALK2Q01415 458 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 EFHC1Q5JVL4 640 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 N4BP2L1Q5TBK1 243 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 TXNDC8Q6A555 127 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 OR52K1Q8NGK4 314 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 SELENOMQ8WWX9 145 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 BAP1Q92560 729 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 CPNE2Q96FN4 548 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 SNX27Q96L92 541 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 NIF3L1Q9GZT8 377 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 SACM1LQ9NTJ5 587 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 SORCS3Q9UPU3 1222 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 hCG_2039718K7EN88 272 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ATP6V1G2O95670 118 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ONECUT2O95948 504 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 IGSF6O95976 241 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 LINC00032P0C843 101 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 LIPCP11150 499 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 FOXK1P85037 733 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 DMWDQ09019 674 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 MOGSQ13724 837 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 TEAD4Q15561 434 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 LIX1LQ8IVB5 337 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 OR4N5Q8IXE1 308 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 TRMT2AQ8IZ69 625 aaKnown RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 NOA1Q8NC60 698 aaKnown RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 FAM46DQ8NEK8 389 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 DNAJC27Q9NZQ0 273 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 NEU2Q9Y3R4 380 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 LGALS16A8MUM7 142 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 VAPBO95292 243 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 C8AP07357 584 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 MYL12AP19105 171 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 SPRP35270 261 aaPredicted RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 MNDAP41218 407 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 HK2P52789 917 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 GNB1P62873 340 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 PTK6Q13882 451 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 MYBPC3Q14896 1274 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 PFKFB4Q16877 469 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF718Q3SXZ3 478 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 APTXQ7Z2E3 356 aaKnown RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 RAVER1Q8IY67 606 aaKnown RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 NELL1Q92832 810 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 TM9SF2Q99805 663 aa3.26□□□□□ -1.89
SYNE2-212ENST00000554584 CARS2Q9HA77 564 aaKnown RBP3.26□□□□□ -1.89
SYNE2-212ENST00000554584 PCDH9Q9HC56 1237 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms